RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 CPQQ9Y646 472 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 DMXL1Q9Y485 3027 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 FAM92AA1XBS5 289 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 TULP2O00295 520 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 GFRA3O60609 400 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 OLFM2O95897 454 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 EGFP01133 1207 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 ZDHHC11BP0C7U3 371 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 FAM200BP0CF97 657 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 MBL2P11226 248 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-211ENST00000581536 ACO1P21399 889 aaKnown RBP10.25□□□□□ -0.77
TOP3A-211ENST00000581536 PPP3CCP48454 512 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 SATB1Q01826 763 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 DMWDQ09019 674 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 USP4Q13107 963 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 CCINQ13939 588 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 LINC01559Q495D7 138 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 SNX30Q5VWJ9 437 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 FSTL4Q6MZW2 842 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 CREBRFQ8IUR6 639 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 NDRG1Q92597 394 aaKnown RBP10.25□□□□□ -0.77
TOP3A-211ENST00000581536 EZH1Q92800 747 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-211ENST00000581536 KAT5Q92993 513 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 CEP63Q96MT8 703 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 DUSP16Q9BY84 665 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 GTPBP4Q9BZE4 634 aaKnown RBP10.25□□□□□ -0.77
TOP3A-211ENST00000581536 CHRDQ9H2X0 955 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 KIF9Q9HAQ2 790 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 EHD2Q9NZN4 543 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 CFAP97Q9P2B7 532 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 ATP8B3O60423 1300 aa10.25□□□□□ -0.77
TOP3A-211ENST00000581536 PRR23AA6NEV1 266 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 TRDMT1O14717 391 aaKnown RBP10.24□□□□□ -0.77
TOP3A-211ENST00000581536 MDM4O15151 490 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 CYP26A1O43174 497 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 TDGF1P13385 188 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 TCF3P15923 654 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 MAGEA9P43362 315 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 SLC6A11P48066 632 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 IFNAR2P48551 515 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 PAK1Q13153 545 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 CUL2Q13617 745 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 PDGFRLQ15198 375 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 GAB4Q2WGN9 574 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 TMEM196Q5HYL7 178 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 HECTD3Q5T447 861 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 RRAGAQ7L523 313 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 SCD5Q86SK9 330 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 ARHGEF19Q8IW93 802 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 UBR7Q8N806 425 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 UBA3Q8TBC4 463 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 NKD2Q969F2 451 aaPredicted RBP10.24□□□□□ -0.77
TOP3A-211ENST00000581536 MRGPRX2Q96LB1 330 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 METTL14Q9HCE5 456 aaKnown RBP10.24□□□□□ -0.77
TOP3A-211ENST00000581536 LMBRD1Q9NUN5 540 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 COMMD8Q9NX08 183 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 FBXO4Q9UKT5 387 aa10.24□□□□□ -0.77
TOP3A-211ENST00000581536 SDK1Q7Z5N4 2213 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 PTPRZ1P23471 2315 aaPredicted RBP10.23□□□□□ -0.77
TOP3A-211ENST00000581536 A0A1W2PQH9 124 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 BICDL2A1A5D9 508 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 IRF1P10914 325 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 VARSP26640 1264 aaKnown RBP10.23□□□□□ -0.77
TOP3A-211ENST00000581536 ANP32AP39687 249 aaKnown RBP10.23□□□□□ -0.77
TOP3A-211ENST00000581536 PPP1R2P41236 205 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 CXCL12P48061 93 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 KIF11P52732 1056 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 MESP2Q0VG99 397 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 DGKKQ5KSL6 1271 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 RHBDF2Q6PJF5 856 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 BPHLQ86WA6 291 aaPredicted RBP10.23□□□□□ -0.77
TOP3A-211ENST00000581536 TTC30AQ86WT1 665 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 IRF2BP1Q8IU81 584 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 SFTPA1Q8IWL2 248 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 TRIM59Q8IWR1 403 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 DCLK2Q8N568 766 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 PDZD8Q8NEN9 1154 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 EPS8L1Q8TE68 723 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 OVCA2Q8WZ82 227 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 TFAP2BQ92481 460 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 NELL1Q92832 810 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 MSANTD3Q96H12 275 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 ZSWIM1Q9BR11 485 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 FBXO44Q9H4M3 255 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 PRMT8Q9NR22 394 aaPredicted RBP10.23□□□□□ -0.77
TOP3A-211ENST00000581536 TLR8Q9NR97 1041 aaKnown RBP10.23□□□□□ -0.77
TOP3A-211ENST00000581536 SCML2Q9UQR0 700 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 PCDHB4Q9Y5E5 795 aa10.23□□□□□ -0.77
TOP3A-211ENST00000581536 LAMA1P25391 3075 aa10.22□□□□□ -0.77
TOP3A-211ENST00000581536 RIF1Q5UIP0 2472 aaKnown RBP10.22□□□□□ -0.77
TOP3A-211ENST00000581536 CHURC1-FNTBB4DL54 471 aa10.22□□□□□ -0.77
TOP3A-211ENST00000581536 K7ESF4 209 aa10.22□□□□□ -0.77
TOP3A-211ENST00000581536 PMM2O15305 246 aa10.22□□□□□ -0.77
TOP3A-211ENST00000581536 TLR5O60602 858 aa10.22□□□□□ -0.77
TOP3A-211ENST00000581536 RARGP13631 454 aa10.22□□□□□ -0.77
TOP3A-211ENST00000581536 PFKLP17858 780 aa10.22□□□□□ -0.77
TOP3A-211ENST00000581536 OPRD1P41143 372 aa10.22□□□□□ -0.77
TOP3A-211ENST00000581536 PXNP49023 591 aaPredicted RBP10.22□□□□□ -0.77
TOP3A-211ENST00000581536 FNTBP49356 437 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms