RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 VCANP13611 3396 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 A0A0C4DFX4 3053 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 A0A087X0T9 212 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 ESPNB1AK53 854 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 OAS1P00973 400 aaKnown RBP16.27■□□□□ 0.2
SS18-216ENST00000580751 CYP1A1P04798 512 aaPredicted RBP16.27■□□□□ 0.2
SS18-216ENST00000580751 CKMP06732 381 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 FAM228BP0C875 321 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 RALAP11233 206 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 DAOAP59103 153 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 YWHAGP61981 247 aaKnown RBP eCLIP16.27■□□□□ 0.2
SS18-216ENST00000580751 MTF1Q14872 753 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 HECTD3Q5T447 861 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 NAA35Q5VZE5 725 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 ALKBH5Q6P6C2 394 aaKnown RBP16.27■□□□□ 0.2
SS18-216ENST00000580751 TOGARAM2Q6ZUX3 1019 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 ERICH1Q86X53 443 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 CMTM8Q8IZV2 173 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 CCAR2Q8N163 923 aaKnown RBP16.27■□□□□ 0.2
SS18-216ENST00000580751 ADAMTS19Q8TE59 1207 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 NXPE3Q969Y0 559 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 CALR3Q96L12 384 aaKnown RBP16.27■□□□□ 0.2
SS18-216ENST00000580751 ZSWIM3Q96MP5 696 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 ASB16Q96NS5 453 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 TRIM62Q9BVG3 475 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 SLC46A2Q9BY10 475 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 TSGA10Q9BZW7 698 aa16.27■□□□□ 0.2
SS18-216ENST00000580751 TCF20Q9UGU0 1960 aaKnown RBP16.26■□□□□ 0.19
SS18-216ENST00000580751 ANAPC1Q9H1A4 1944 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 A0A1W2PQH9 124 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 C2orf78A6NCI8 922 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 PIK3R2O00459 728 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 DDX3XO00571 662 aaKnown RBP eCLIP16.26■□□□□ 0.191e-15■■■□□ 17.7
SS18-216ENST00000580751 ZNF500O60304 480 aaPredicted RBP16.26■□□□□ 0.19
SS18-216ENST00000580751 TLR5O60602 858 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 GABBR2O75899 941 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 OLFM2O95897 454 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 HDCP19113 662 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 MAGEA1P43355 309 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 NSFP46459 744 aaKnown RBP16.26■□□□□ 0.19
SS18-216ENST00000580751 VAV2P52735 878 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 CENPCQ03188 943 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 GFPT1Q06210 699 aaPredicted RBP16.26■□□□□ 0.19
SS18-216ENST00000580751 CLEC16AQ2KHT3 1053 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 PTPN20Q4JDL3 420 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 FAM78AQ5JUQ0 283 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 SCD5Q86SK9 330 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 ZDHHC17Q8IUH5 632 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 SCUBE3Q8IX30 993 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 ZNF276Q8N554 614 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 E2F7Q96AV8 911 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 VCPIP1Q96JH7 1222 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 NACA2Q9H009 215 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 ISCUQ9H1K1 167 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 KIF9Q9HAQ2 790 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 NMUR1Q9HB89 426 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 TRPV4Q9HBA0 871 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 IGSF9Q9P2J2 1179 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 PCDHA13Q9Y5I0 950 aa16.26■□□□□ 0.19
SS18-216ENST00000580751 NUP210Q8TEM1 1887 aaPredicted RBP16.26■□□□□ 0.19
SS18-216ENST00000580751 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 BTNL10A8MVZ5 291 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 E7ENQ6 273 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 ANHXE9PGG2 379 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 PJA2O43164 708 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 PAPSS1O43252 624 aaPredicted RBP16.25■□□□□ 0.19
SS18-216ENST00000580751 RTN2O75298 545 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 ECI2O75521 394 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 UNGP13051 313 aaPredicted RBP16.25■□□□□ 0.19
SS18-216ENST00000580751 RARGP13631 454 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 HTR4Q13639 388 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 ZNF268Q14587 947 aaPredicted RBP16.25■□□□□ 0.19
SS18-216ENST00000580751 CCDC122Q5T0U0 273 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 BTBD8Q5XKL5 378 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 KLHDC10Q6PID8 442 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 BHLHA9Q7RTU4 235 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 ARID3BQ8IVW6 561 aaPredicted RBP16.25■□□□□ 0.19
SS18-216ENST00000580751 GJD3Q8N144 294 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 ARL14EPQ8N8R7 260 aaPredicted RBP16.25■□□□□ 0.19
SS18-216ENST00000580751 OLIG1Q8TAK6 271 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 CPA5Q8WXQ8 436 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 C18orf8Q96DM3 657 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 TRIM11Q96F44 468 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 UHRF1Q96T88 793 aaPredicted RBP16.25■□□□□ 0.19
SS18-216ENST00000580751 PCDHB18PQ96TA0 734 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 CCSER2Q9H7U1 834 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 ZFP14Q9HCL3 533 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 SPTLC3Q9NUV7 552 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.25■□□□□ 0.19
SS18-216ENST00000580751 OBP2AQ9NY56 170 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 LIMD1Q9UGP4 676 aa16.25■□□□□ 0.19
SS18-216ENST00000580751 DPYSL4O14531 572 aa16.24■□□□□ 0.19
SS18-216ENST00000580751 ZNF263O14978 683 aa16.24■□□□□ 0.19
SS18-216ENST00000580751 COCHO43405 550 aa16.24■□□□□ 0.19
SS18-216ENST00000580751 KRT86O43790 486 aa16.24■□□□□ 0.19
SS18-216ENST00000580751 LTFP02788 710 aa16.24■□□□□ 0.19
SS18-216ENST00000580751 ERBB2P04626 1255 aa16.24■□□□□ 0.19
SS18-216ENST00000580751 H2AFZP0C0S5 128 aa16.24■□□□□ 0.19
SS18-216ENST00000580751 MYBL1P10243 752 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms