RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 TDRD5Q8NAT2 981 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 TMEM176AQ96HP8 235 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 AP4E1Q9UPM8 1137 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 RUVBL2Q9Y230 463 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 M0QYT0 321 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 SMNDC1O75940 238 aaKnown RBP eCLIP14.03□□□□□ -0.163e-7■□□□□ 8.1
TRAPPC8-207ENST00000580104 ABHD2P08910 425 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 SKIV2L2P42285 1042 aaKnown RBP14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 SCUBE3Q8IX30 993 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 COLGALT1Q8NBJ5 622 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 APPL2Q8NEU8 664 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 PPHLN1Q8NEY8 458 aaKnown RBP14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 OR5B17Q8NGF7 314 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZSCAN18Q8TBC5 510 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 FAM136AQ96C01 138 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 TCF7L2Q9NQB0 619 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 TMEM59LQ9UK28 342 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 APOC4-APOC2K7ER74 178 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 USP12O75317 370 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 PMPCBO75439 489 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 APOC2P02655 101 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 SNHG28P0DPA3 235 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 PDK2Q15119 407 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 PARP6Q2NL67 630 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 DENND1BQ6P3S1 775 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 ARHGAP22Q7Z5H3 698 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 USP6NLQ92738 828 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 OPTNQ96CV9 577 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 SLC5A4Q9NY91 659 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 IL1RAPL1Q9NZN1 696 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 UBR1Q8IWV7 1749 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 PEX1O43933 1283 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 BNIP3LO60238 219 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 VDRP11473 427 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 MGAT1P26572 445 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 FOXN2P32314 431 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 HSD17B4P51659 736 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 MRPS22P82650 360 aaKnown RBP14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 FAM182AQ5T1J6 154 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 MFN1Q8IWA4 741 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 MMP19Q99542 508 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 PRPF18Q99633 342 aaKnown RBP14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 KCNK4Q9NYG8 393 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 PKD2L2Q9NZM6 624 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 ARHGEF37A1IGU5 675 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 TPH1P17752 444 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 GRK2P25098 689 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 PTK2BQ14289 1009 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 UGP2Q16851 508 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 C6orf10Q5SRN2 563 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 CLEC4FQ8N1N0 589 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 CPB2Q96IY4 423 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZNF317Q96PQ6 595 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 CDRT15Q96T59 188 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 NMUR2Q9GZQ4 415 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 DEFB129Q9H1M3 183 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 DPP3Q9NY33 737 aa14.03□□□□□ -0.16
TRAPPC8-207ENST00000580104 ALOX15BO15296 676 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 ANPEPP15144 967 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 XRRA1Q6P2D8 792 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 MPZL3Q6UWV2 235 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 UNC45BQ8IWX7 931 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 MAN1C1Q9NR34 630 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 TBC1D23Q9NUY8 699 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 KLK14Q9P0G3 267 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 SLC12A4Q9UP95 1085 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 CHKBQ9Y259 395 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 H0YGN5 161 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 KCNK1O00180 336 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 GSC2O15499 205 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 SERPINE1P05121 402 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 MLH1P40692 756 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 PLIN5Q00G26 463 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 CAPRIN1Q14444 709 aaKnown RBP14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 KHDC1Q4VXA5 237 aaKnown RBP14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 VSTM1Q6UX27 236 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 FRA10AC1Q70Z53 315 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 SETD3Q86TU7 594 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 JADE3Q92613 823 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 PABPC5Q96DU9 382 aaKnown RBP14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 GRIP2Q9C0E4 1043 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 ACSS3Q9H6R3 686 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 COPS7BQ9H9Q2 264 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 PIM2Q9P1W9 311 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 TSPAN16Q9UKR8 245 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 NFS1Q9Y697 457 aa14.02□□□□□ -0.16
TRAPPC8-207ENST00000580104 hCG_1818297A0A087WSY0 165 aa14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 STAG3L1P0CL83 205 aa14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 HADHAP40939 763 aa14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 C6orf89Q6UWU4 347 aa14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 SNX32Q86XE0 403 aa14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 CCDC60Q8IWA6 550 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 PRMT7Q9NVM4 692 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 MRPL42Q9Y6G3 142 aaKnown RBP14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 TCRBV9S1A1TA0A576 114 aa14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 KCNA2P16389 499 aa14.02□□□□□ -0.17
TRAPPC8-207ENST00000580104 AMPD1P23109 780 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms