RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TAF4BQ92750 862 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 B3GNT5Q9BYG0 378 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 IMPG2Q9BZV3 1241 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 XYLT2Q9H1B5 865 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 SPHK2Q9NRA0 654 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 INVSQ9Y283 1065 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 PCDH15Q96QU1 1955 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 BIN1O00499 593 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 CLDN5O00501 218 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 TLR5O60602 858 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 AP1G2O75843 785 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 KIF20AO95235 890 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 HOXB2P14652 356 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 PRCPP42785 496 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 NCOA4Q13772 614 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 HNRNPDQ14103 355 aaKnown RBP14.13□□□□□ -0.15
TRAF4-214ENST00000580073 MORC3Q14149 939 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 ANO4Q32M45 955 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 UAP1L1Q3KQV9 507 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 LY6G5CQ5SRR4 150 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 C10orf76Q5T2E6 689 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 PEAR1Q5VY43 1037 aaPredicted RBP14.13□□□□□ -0.15
TRAF4-214ENST00000580073 SCARA3Q6AZY7 606 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 GRAMD4Q6IC98 578 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 SLC23A3Q6PIS1 610 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 UNC93AQ86WB7 457 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 C12orf40Q86WS4 652 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 ETFBKMTQ8IXQ9 262 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 SMARCE1Q969G3 411 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 GSDMAQ96QA5 445 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 ADAM33Q9BZ11 813 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 SMYD3Q9H7B4 428 aa14.13□□□□□ -0.15
TRAF4-214ENST00000580073 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 FAM92AA1XBS5 289 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 TULP3O75386 442 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 NTSR1P30989 418 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 SLC6A11P48066 632 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 CACNA2D1P54289 1103 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 IRX4P78413 519 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 RPL6Q02878 288 aaKnown RBP14.12□□□□□ -0.15
TRAF4-214ENST00000580073 DUOXA1Q1HG43 343 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 SGSM1Q2NKQ1 1148 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 SCARA5Q6ZMJ2 495 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 TMEFF1Q8IYR6 380 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
TRAF4-214ENST00000580073 CDK5RAP1Q96SZ6 601 aaKnown RBP14.12□□□□□ -0.15
TRAF4-214ENST00000580073 PNPLA8Q9NP80 782 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 IL37Q9NZH6 218 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 GMIPQ9P107 970 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 KIAA1468Q9P260 1216 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 WDR35Q9P2L0 1181 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 SUSD2Q9UGT4 822 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 NME7Q9Y5B8 376 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 CKAP5Q14008 2032 aa14.12□□□□□ -0.15
TRAF4-214ENST00000580073 PCNX2A6NKB5 2137 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 UPK3BL1B0FP48 263 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 PATE3B3GLJ2 98 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 PPP1R3GB7ZBB8 358 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 UPK3BL2E5RIL1 263 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 H0Y626 953 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 CDX4O14627 284 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-214ENST00000580073 SCAMP3O14828 347 aaKnown RBP14.11□□□□□ -0.15
TRAF4-214ENST00000580073 CACNG3O60359 315 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 SMC2O95347 1197 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 TRIM16O95361 564 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 CFIP05156 583 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 SYPP08247 313 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 ZDHHC11BP0C7U3 371 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 FAM200BP0CF97 657 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 ENGP17813 658 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 PIK3CAP42336 1068 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 PMS1P54277 932 aaKnown RBP14.11□□□□□ -0.15
TRAF4-214ENST00000580073 CLDN10P78369 228 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 GFPT1Q06210 699 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-214ENST00000580073 MAP7D1Q3KQU3 841 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 ZNF658Q5TYW1 1059 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-214ENST00000580073 ARMCX6Q7L4S7 300 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 SLC9A9Q8IVB4 645 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 BBS7Q8IWZ6 715 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 PHTF2Q8N3S3 785 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 GUF1Q8N442 669 aaKnown RBP14.11□□□□□ -0.15
TRAF4-214ENST00000580073 CCDC150Q8NCX0 1101 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 TMEM174Q8WUU8 243 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 RLN3Q8WXF3 142 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 CCDC47Q96A33 483 aaKnown RBP14.11□□□□□ -0.15
TRAF4-214ENST00000580073 KCNK16Q96T55 309 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 CCSER2Q9H7U1 834 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 TMEM30AQ9NV96 361 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 DNAJC17Q9NVM6 304 aaKnown RBP14.11□□□□□ -0.15
TRAF4-214ENST00000580073 DMAC2Q9NW81 257 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 SLC6A14Q9UN76 642 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 FRMD4BQ9Y2L6 1034 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 STARD13Q9Y3M8 1113 aa14.11□□□□□ -0.15
TRAF4-214ENST00000580073 LRRIQ3A6PVS8 624 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-214ENST00000580073 NEDD8-MDP1E9PL57 170 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 NPC1O15118 1278 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 OPHN1O60890 802 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 ADAM23O75077 832 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 IRF1P10914 325 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms