RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 HOXB2P14652 356 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 CASP1P29466 404 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 RPL6Q02878 288 aaKnown RBP20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 DUOXA1Q1HG43 343 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 GRAMD4Q6IC98 578 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 RABEPKQ7Z6M1 372 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 PIP4P1Q86T03 277 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 ACOT1Q86TX2 421 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 ZMIZ2Q8NF64 920 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 GATA6Q92908 595 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 SMOQ99835 787 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 FBXO44Q9H4M3 255 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 CSNK1G1Q9HCP0 422 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 CALCOCO1Q9P1Z2 691 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 FAM208BQ5VWN6 2430 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 A0A1W2PQF6 199 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 GREM1O60565 184 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 VNN1O95497 513 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 CFIP05156 583 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 SERPINF2P08697 491 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 SEMA3BQ13214 749 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 MIB1Q86YT6 1006 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 CRYBG2Q8N1P7 616 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 SLC2A14Q8TDB8 520 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 TMEM174Q8WUU8 243 aa20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 TLR8Q9NR97 1041 aaKnown RBP20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 RALYQ9UKM9 306 aaKnown RBP20.3■□□□□ 0.84
CDKN2A-213ENST00000579122 ASCC3Q8N3C0 2202 aaKnown RBP20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 TRIM24O15164 1050 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 ZBTB24O43167 697 aaPredicted RBP20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 CACNG3O60359 315 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 ZNF217O75362 1048 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 BEST1O76090 585 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 CCDC130P13994 396 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 PGFP49763 221 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 ATXN3P54252 364 aaPredicted RBP20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 GFPT1Q06210 699 aaPredicted RBP20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 CUL4BQ13620 913 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 SGSM1Q2NKQ1 1148 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 EGFLAMQ63HQ2 1017 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 SDE2Q6IQ49 451 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 UNC93AQ86WB7 457 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 HDDC3Q8N4P3 179 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 XPO6Q96QU8 1125 aaKnown RBP20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 KLF16Q9BXK1 252 aaPredicted RBP20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 CAPN10Q9HC96 672 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 CD248Q9HCU0 757 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 CYLDQ9NQC7 956 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 DNAJC17Q9NVM6 304 aaKnown RBP20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 DMAC2Q9NW81 257 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 MARK1Q9P0L2 795 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 WDR35Q9P2L0 1181 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 NEUROG3Q9Y4Z2 214 aa20.29■□□□□ 0.84
CDKN2A-213ENST00000579122 IGHV1OR15-9A0A0B4J2B8 117 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 NEDD8-MDP1E9PL57 170 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 RPN1P04843 607 aaKnown RBP20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 HSP90AA1P07900 732 aaKnown RBP20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 WASP42768 502 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 NDST1P52848 882 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 MAP3K7CLP57077 242 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 ZNF33AQ06730 810 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 GOLGA8FQ08AF8 430 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 GOLGA8DPQ0D2H9 430 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 SLC9A9Q8IVB4 645 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 CHPFQ8IZ52 775 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 DEFB119Q8N690 84 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 SPRYD3Q8NCJ5 442 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 TAF4BQ92750 862 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 ELMO3Q96BJ8 720 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 GABRG3Q99928 467 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 GTPBP2Q9BX10 602 aaKnown RBP20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 BBS2Q9BXC9 721 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 FAM13BQ9NYF5 915 aa20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 LSM7Q9UK45 103 aaKnown RBP20.28■□□□□ 0.84
CDKN2A-213ENST00000579122 TBX18O95935 607 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 TYRP14679 529 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 ATP5C1P36542 298 aaKnown RBP20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 AFMP43652 599 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 SIM1P81133 766 aaPredicted RBP20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 ORC1Q13415 861 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 ZACNQ401N2 412 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 KIAA1211LQ6NV74 962 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 IPO4Q8TEX9 1081 aaKnown RBP20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 ACOX2Q99424 681 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 FSCN3Q9NQT6 498 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 SCML2Q9UQR0 700 aa20.27■□□□□ 0.84
CDKN2A-213ENST00000579122 MYO18AQ92614 2054 aaKnown RBP20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 SPAARA0A1B0GVQ0 90 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 HYAL3O43820 417 aaPredicted RBP20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 OPHN1O60890 802 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 FAM200BP0CF97 657 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 NDUFV2P19404 249 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 TRIM21P19474 475 aaKnown RBP20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 DLG4P78352 724 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 RESP18Q5W5W9 173 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 C12orf29Q8N999 325 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 FAM49BQ9NUQ9 324 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 OSER1Q9NX31 292 aa20.26■□□□□ 0.83
CDKN2A-213ENST00000579122 HMGXB4Q9UGU5 601 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms