RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 SPRYD7Q5W111 196 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CYB5D1Q6P9G0 228 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FUKQ8N0W3 1084 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ANKRD52Q8NB46 1076 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PCDH19Q8TAB3 1148 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 LRRC8CQ8TDW0 803 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KBTBD7Q8WVZ9 684 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CENPIQ92674 756 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HSFY1Q96LI6 401 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C11orf84Q9BUA3 381 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 APOL6Q9BWW8 343 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PITPNM3Q9BZ71 974 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TRIM6Q9C030 488 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KLC2Q9H0B6 622 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DPEP3Q9H4B8 488 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NXF3Q9H4D5 531 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NRDE2Q9H7Z3 1164 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ECT2Q9H8V3 914 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RXFP1Q9HBX9 757 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RAB6BQ9NRW1 208 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KLHL14Q9P2G3 628 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GNEQ9Y223 722 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GINS2Q9Y248 185 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TEX264Q9Y6I9 313 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 IQANK1A0A1B0GTG1 560 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SMIM28A0A1B0GU29 152 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 KPNA7A9QM74 516 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 KBTBD13C9JR72 458 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 TM9SF1O15321 606 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 EDF1O60869 148 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 DAB1O75553 588 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 GSTA2P09210 222 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 FGFR1P11362 822 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 CCDC130P13994 396 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 WARSP23381 471 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 L1CAMP32004 1257 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 GNL1P36915 607 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 NRLP54845 237 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 YWHAGP61981 247 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 ADAM17P78536 824 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 ELF3P78545 371 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 BNIP1Q12981 228 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 MAP2K5Q13163 448 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SNX17Q15036 470 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SNCBQ16143 134 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 DPYSL2Q16555 572 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SLC45A4Q5BKX6 768 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 MORN1Q5T089 497 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 UBXN11Q5T124 520 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 ICE2Q659A1 982 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 LVRNQ6Q4G3 990 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 FAM47EQ6ZV65 393 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 IGDCC3Q8IVU1 814 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SCUBE3Q8IX30 993 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 PARP9Q8IXQ6 854 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 C7orf31Q8N865 590 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 BANPQ8N9N5 519 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 MCUQ8NE86 351 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 DNAJB3Q8WWF6 145 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SLC44A1Q8WWI5 657 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 QKIQ96PU8 341 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 KCTD15Q96SI1 283 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 LPIN3Q9BQK8 851 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 B3GNT5Q9BYG0 378 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 PRDM16Q9HAZ2 1276 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 ETNK2Q9NVF9 386 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 GJD2Q9UKL4 321 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 PHTF1Q9UMS5 762 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 AP4E1Q9UPM8 1137 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 PIN4Q9Y237 131 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 TTLL3Q9Y4R7 772 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 HES2Q9Y543 173 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 HEY1Q9Y5J3 304 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 USH1CQ9Y6N9 552 aa9.71□□□□□ -0.86
CDK5RAP3-208ENST00000578525 XPO1O14980 1071 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SPTLC1O15269 473 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 HCRTO43612 131 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 GCATO75600 419 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 MT-ND3P03897 115 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 INHBAP08476 426 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 MYL3P08590 195 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 FAM163BP0C2L3 166 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 LCP1P13796 627 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 NQO1P15559 274 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 KRT4P19013 534 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 TFE3P19532 575 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 TPSB2P20231 275 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 AKAP5P24588 427 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 NR2C2P49116 596 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 ZNF200P98182 395 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SLC18A2Q05940 514 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 MGAT5Q09328 741 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 DNAJC3Q13217 504 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 PTK7Q13308 1070 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 TPSAB1Q15661 275 aa9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 SEPT7Q16181 437 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-208ENST00000578525 EFHC1Q5JVL4 640 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms