RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 YIPF1Q9Y548 306 aa14.04□□□□□ -0.16
SRSF1-202ENST00000578430 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
SRSF1-202ENST00000578430 SLC38A8A6NNN8 435 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 DDX3YO15523 660 aaKnown RBP14.03□□□□□ -0.16
SRSF1-202ENST00000578430 TGM5O43548 720 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 NCK2O43639 380 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 GRAP2O75791 330 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 GLUD1P00367 558 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 KRT7P08729 469 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 ATF6P18850 670 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 DNAJB1P25685 340 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 GPR15P49685 360 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 EPHB3P54753 998 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 RWDD2BP57060 319 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
SRSF1-202ENST00000578430 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 PPP2R2DQ66LE6 453 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 TRNP1Q6NT89 227 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 ELMSAN1Q6PJG2 1045 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 ITIH5Q86UX2 942 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 DEFB106AQ8N104 65 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 MICAL1Q8TDZ2 1067 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 HDAC7Q8WUI4 952 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 PGAP3Q96FM1 320 aaPredicted RBP14.03□□□□□ -0.16
SRSF1-202ENST00000578430 TRMT2BQ96GJ1 504 aaKnown RBP14.03□□□□□ -0.16
SRSF1-202ENST00000578430 SLITRK1Q96PX8 696 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 OSBPL9Q96SU4 736 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 NPY6RQ99463 290 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 NKX2-4Q9H2Z4 354 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 L2HGDHQ9H9P8 463 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 DDX56Q9NY93 547 aaKnown RBP14.03□□□□□ -0.16
SRSF1-202ENST00000578430 CLIC5Q9NZA1 410 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 FBXW11Q9UKB1 542 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 MTUS1Q9ULD2 1270 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 USTQ9Y2C2 406 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 INSL5Q9Y5Q6 135 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 PRUNE2Q8WUY3 3088 aa14.03□□□□□ -0.16
SRSF1-202ENST00000578430 COL4A4P53420 1690 aaPredicted RBP14.02□□□□□ -0.16
SRSF1-202ENST00000578430 LRCH4O75427 683 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 SOAT2O75908 522 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 ENDOD1O94919 500 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 F9P00740 461 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 PBX2P40425 430 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 PPP3CCP48454 512 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 PEX5P50542 639 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 WHAMMP3Q1A5X7 153 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 DCAF6Q58WW2 860 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 BTBD8Q5XKL5 378 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 KATNAL2Q8IYT4 538 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 ZNF276Q8N554 614 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 NDRG1Q92597 394 aaKnown RBP14.02□□□□□ -0.17
SRSF1-202ENST00000578430 FBXO32Q969P5 355 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 MYRFLQ96LU7 910 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 CFAP57Q96MR6 1250 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 CDK5RAP1Q96SZ6 601 aaKnown RBP14.02□□□□□ -0.17
SRSF1-202ENST00000578430 TBCBQ99426 244 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 COL25A1Q9BXS0 654 aaPredicted RBP14.02□□□□□ -0.17
SRSF1-202ENST00000578430 PLEKHA4Q9H4M7 779 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 TLR8Q9NR97 1041 aaKnown RBP14.02□□□□□ -0.17
SRSF1-202ENST00000578430 UXTQ9UBK9 157 aaPredicted RBP14.02□□□□□ -0.17
SRSF1-202ENST00000578430 PACSIN2Q9UNF0 486 aaPredicted RBP14.02□□□□□ -0.17
SRSF1-202ENST00000578430 MRFAP1Q9Y605 127 aa14.02□□□□□ -0.17
SRSF1-202ENST00000578430 PLXNA3P51805 1871 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 HIDE1A8MVS5 230 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 KCNK3O14649 394 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 FYNP06241 537 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 ZDHHC11BP0C7U3 371 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 NCAM1P13591 858 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 CETN2P41208 172 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 SSR1P43307 286 aaKnown RBP14.01□□□□□ -0.17
SRSF1-202ENST00000578430 CKAP4Q07065 602 aaKnown RBP14.01□□□□□ -0.17
SRSF1-202ENST00000578430 TWF1Q12792 350 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 CAMK1Q14012 370 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 TAF12Q16514 161 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 BOLA3Q53S33 107 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 SDHAF4Q5VUM1 108 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 SNX30Q5VWJ9 437 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 MSANTD2Q6P1R3 559 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 HFE2Q6ZVN8 426 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 BNIPLQ7Z465 357 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 SCD5Q86SK9 330 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 PSTKQ8IV42 348 aaKnown RBP14.01□□□□□ -0.17
SRSF1-202ENST00000578430 KREMEN2Q8NCW0 462 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 GIPC2Q8TF65 315 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 RNF139Q8WU17 664 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 FAM172AQ8WUF8 416 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 TEKT4Q8WW24 435 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 PSMG2Q969U7 264 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 OLA1Q9NTK5 396 aaKnown RBP14.01□□□□□ -0.17
SRSF1-202ENST00000578430 USP18Q9UMW8 372 aa14.01□□□□□ -0.17
SRSF1-202ENST00000578430 GREB1Q4ZG55 1949 aa14□□□□□ -0.17
SRSF1-202ENST00000578430 PRPSAP2O60256 369 aa14□□□□□ -0.17
SRSF1-202ENST00000578430 LRG1P02750 347 aa14□□□□□ -0.17
SRSF1-202ENST00000578430 RALAP11233 206 aa14□□□□□ -0.17
SRSF1-202ENST00000578430 MIPP30301 263 aa14□□□□□ -0.17
SRSF1-202ENST00000578430 HOXA9P31269 272 aa14□□□□□ -0.17
SRSF1-202ENST00000578430 GBP1P32455 592 aa14□□□□□ -0.17
SRSF1-202ENST00000578430 RDXP35241 583 aaKnown RBP14□□□□□ -0.17
SRSF1-202ENST00000578430 PAFAH1B1P43034 410 aa14□□□□□ -0.17
SRSF1-202ENST00000578430 SULT1E1P49888 294 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms