RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CCP110O43303 1012 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CNPP09543 421 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 TMEM253P0C7T8 217 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 BDNFP23560 247 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 DNAJB1P25685 340 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 NSFP46459 744 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 TUFMP49411 452 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 VAV2P52735 878 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 GALCP54803 685 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 GSCP56915 257 aaPredicted RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 GPC5P78333 572 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ROR1Q01973 937 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 PDCLQ13371 301 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 GPM6BQ13491 265 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ZNF268Q14587 947 aaPredicted RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 SMC1AQ14683 1233 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 GOLGA7BQ2TAP0 167 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 SLC39A12Q504Y0 691 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 RAB41Q5JT25 222 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 NAA35Q5VZE5 725 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 PMF1Q6P1K2 205 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CLEC20AQ6ZU45 233 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 MON1BQ7L1V2 547 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ERICH1Q86X53 443 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ZDHHC17Q8IUH5 632 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 MCOLN2Q8IZK6 566 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ATAD1Q8NBU5 361 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 MSANTD4Q8NCY6 345 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 UBA3Q8TBC4 463 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CPA5Q8WXQ8 436 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 SECISBP2LQ93073 1101 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 TIFAQ96CG3 184 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 TRIM11Q96F44 468 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 PPP1R13BQ96KQ4 1090 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 SPATA17Q96L03 361 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 C8orf48Q96LL4 319 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 FRMD6Q96NE9 622 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 SMOQ99835 787 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 TCF25Q9BQ70 676 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 EMILIN2Q9BXX0 1053 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 NKX2-4Q9H2Z4 354 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 AVENQ9NQS1 362 aaPredicted RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 SEPT11Q9NVA2 429 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 IL37Q9NZH6 218 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ADAM22Q9P0K1 906 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 WDR35Q9P2L0 1181 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 PYCARDQ9ULZ3 195 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 PPP2R2CQ9Y2T4 447 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 TMEM265A0A087WTH1 108 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 A0A0A6YYK5 440 aaPredicted RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 WDR27A2RRH5 827 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 MTMR11A4FU01 709 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 GOLGA6L9A6NEM1 432 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 C2orf71A6NGG8 1288 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 HHLA1C9JL84 531 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 EIF1AYO14602 144 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 VNN2O95498 520 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CYP1A2P05177 515 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CALB1P05937 261 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 OR4Q2P0C623 313 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 HAPLN1P10915 354 aaPredicted RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 CPB1P15086 417 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CYP2F1P24903 491 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ADORA2BP29275 332 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 KIF5AQ12840 1032 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 DUSP4Q13115 394 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CCDC142Q17RM4 750 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 PTPN20Q4JDL3 420 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ARCQ7LC44 396 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 SPRED2Q7Z698 418 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 PIGZQ86VD9 579 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 PASD1Q8IV76 773 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 TCEAL8Q8IYN2 117 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 SCML4Q8N228 414 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 RNF10Q8N5U6 811 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 C1orf131Q8NDD1 294 aaKnown RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 ACRBPQ8NEB7 543 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ZMIZ2Q8NF64 920 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 UBE2Q2Q8WVN8 375 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CTNNBL1Q8WYA6 563 aaPredicted RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 C18orf8Q96DM3 657 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 KLHL5Q96PQ7 755 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 MED10Q9BTT4 135 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 DMAP1Q9NPF5 467 aaPredicted RBP8.43□□□□□ -1.06
COPS3-215ENST00000578317 COMMD8Q9NX08 183 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CYTH4Q9UIA0 394 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 STRIP2Q9ULQ0 834 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 TRANK1O15050 2925 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 TCRBV5S1A1TA0A578 114 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 FAM92AA1XBS5 289 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 TTLL8A6PVC2 850 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 TMCO5BA8MYB1 307 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 TULP2O00295 520 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 LPXNO60711 386 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 BEST1O76090 585 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 RPL17P18621 184 aaKnown RBP8.42□□□□□ -1.06
COPS3-215ENST00000578317 HADHBP55084 474 aaKnown RBP8.42□□□□□ -1.06
COPS3-215ENST00000578317 MAP3K7CLP57077 242 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 RPL10AP62906 217 aaKnown RBP8.42□□□□□ -1.06
COPS3-215ENST00000578317 LIN9Q5TKA1 542 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms