RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 UROC1Q96N76 676 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 TBC1D32Q96NH3 1257 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ACO2Q99798 780 aaKnown RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ADPGKQ9BRR6 497 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 POLR3CQ9BUI4 534 aaPredicted RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 EDEM2Q9BV94 578 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 TARS2Q9BW92 718 aaKnown RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 DUSP15Q9H1R2 295 aaPredicted RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 C2orf40Q9H1Z8 148 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 GSX1Q9H4S2 264 aaPredicted RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 SLITRK6Q9H5Y7 841 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 FBRSL1Q9HCM7 1045 aaKnown RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 PTPRHQ9HD43 1115 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 TUFT1Q9NNX1 390 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 HPS4Q9NQG7 708 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ORC3Q9UBD5 711 aaPredicted RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 AFF4Q9UHB7 1163 aaKnown RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 PCOLCE2Q9UKZ9 415 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 TPCN1Q9ULQ1 816 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 TNFSF13BQ9Y275 285 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ACTL7BQ9Y614 415 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 MYOFQ9NZM1 2061 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 PLXNB3Q9ULL4 1909 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 FAM221AA4D161 298 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 MTMR11A4FU01 709 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ARHGEF35A5YM69 484 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 PATE3B3GLJ2 98 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 TRAPPC3O43617 180 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 PFKFB2O60825 505 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 TADA3O75528 432 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 RPP40O75818 363 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 BAG4O95429 457 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 EGFP01133 1207 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CCDC192P0DO97 292 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CXCL8P10145 99 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ARSAP15289 507 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 KCNE1P15382 129 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 RAB6AP20340 208 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 MAP4P27816 1152 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 PSMA5P28066 241 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 GABRR2P28476 465 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 MCM4P33991 863 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 MCM7P33993 719 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CNR2P34972 360 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 TNFSF9P41273 254 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 NPTX2P47972 431 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF165P49910 485 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 NOVA1P51513 510 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 PEX3P56589 373 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ETF1P62495 437 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 GUCY1B3Q02153 619 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 RAD51AP2Q09MP3 1159 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 DUSP4Q13115 394 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 PLD1Q13393 1074 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 INPP5AQ14642 412 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 SLC10A6Q3KNW5 377 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 PLK5Q496M5 336 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 SGO2Q562F6 1265 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 DGKKQ5KSL6 1271 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 GPR158Q5T848 1215 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 TPGS2Q68CL5 300 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 RNF43Q68DV7 783 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 IQCEQ6IPM2 695 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 KIAA1211LQ6NV74 962 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CPLX2Q6PUV4 134 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 PAOXQ6QHF9 649 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 KCNK18Q7Z418 384 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 RALGPS2Q86X27 583 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ARID3BQ8IVW6 561 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 FAM20CQ8IXL6 584 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 YAF2Q8IY57 180 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 DIS3L2Q8IYB7 885 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 SMYD4Q8IYR2 804 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 FAM177A1Q8N128 213 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ARMC10Q8N2F6 343 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ELMOD1Q8N336 334 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ATAD1Q8NBU5 361 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 NSUN7Q8NE18 718 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 OR10T2Q8NGX3 314 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CSGALNACT1Q8TDX6 532 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 DDX1Q92499 740 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 MSANTD3Q96H12 275 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF512Q96ME7 567 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 NAP1L4Q99733 375 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CCDC94Q9BW85 323 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 SSBP4Q9BWG4 385 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 LSM14BQ9BX40 385 aaKnown RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ACBD3Q9H3P7 528 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 C8orf33Q9H7E9 229 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CAPN10Q9HC96 672 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 PDRG1Q9NUG6 133 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ANKFY1Q9P2R3 1169 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CCL26Q9Y258 94 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 RAXQ9Y2V3 346 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 NUB1Q9Y5A7 615 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 CYP46A1Q9Y6A2 500 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 TP53BP1Q12888 1972 aaPredicted RBP4.29□□□□□ -1.72
PTPRM-206ENST00000578093 KALRNO60229 2985 aa4.29□□□□□ -1.72
PTPRM-206ENST00000578093 ASH1LQ9NR48 2969 aaKnown RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 PTPRBP23467 1997 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms