RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 CDK16Q00536 496 aa11.25□□□□□ -0.61
RNF43-203ENST00000577716 CYLC2Q14093 348 aaPredicted RBP11.25□□□□□ -0.61
RNF43-203ENST00000577716 PDPK2PQ6A1A2 396 aa11.25□□□□□ -0.61
RNF43-203ENST00000577716 IL31Q6EBC2 164 aa11.25□□□□□ -0.61
RNF43-203ENST00000577716 EFHBQ8N7U6 833 aa11.25□□□□□ -0.61
RNF43-203ENST00000577716 RUBCNLQ9H714 662 aa11.25□□□□□ -0.61
RNF43-203ENST00000577716 SLC38A7Q9NVC3 462 aa11.25□□□□□ -0.61
RNF43-203ENST00000577716 THAP1Q9NVV9 213 aa11.25□□□□□ -0.61
RNF43-203ENST00000577716 RUVBL2Q9Y230 463 aaKnown RBP11.25□□□□□ -0.61
RNF43-203ENST00000577716 NALCNQ8IZF0 1738 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 DCDC2CA8MYV0 355 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 ADAMTS3O15072 1205 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 LIASO43766 372 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 SNHG28P0DPA3 235 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 KDELR1P24390 212 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 ATICP31939 592 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 HDAC4P56524 1084 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 PLOD1Q02809 727 aaPredicted RBP11.24□□□□□ -0.61
RNF43-203ENST00000577716 DCAF4L1Q3SXM0 396 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 ZNF484Q5JVG2 852 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 IYDQ6PHW0 289 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 PALB2Q86YC2 1186 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 IL31RAQ8NI17 732 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 URGCPQ8TCY9 931 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 CYP4F12Q9HCS2 524 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 ACOT9Q9Y305 439 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 E7ENQ6 273 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 ALADP13716 330 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 RBL1P28749 1068 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 PTPN7P35236 360 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 RECQLP46063 649 aaPredicted RBP11.24□□□□□ -0.61
RNF43-203ENST00000577716 ZACNQ401N2 412 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 LRRC74BQ6ZQY2 392 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 LRRC57Q8N9N7 239 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNF43-203ENST00000577716 RFWD2Q8NHY2 731 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 CERKQ8TCT0 537 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 JADE3Q92613 823 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 APBB2Q92870 758 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 SLITRK1Q96PX8 696 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 PCDHB18PQ96TA0 734 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 GID8Q9NWU2 228 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 IRAK4Q9NWZ3 460 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 UBP1Q9NZI7 540 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 NDUFA13Q9P0J0 144 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 V9GYQ6 96 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 RRN3P2A6NIE6 340 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 SERPINE1P05121 402 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 HSPA1AP0DMV8 641 aaKnown RBP11.24□□□□□ -0.61
RNF43-203ENST00000577716 HSPA1BP0DMV9 641 aaKnown RBP11.24□□□□□ -0.61
RNF43-203ENST00000577716 GP5P40197 560 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 TBL3Q12788 808 aaKnown RBP11.24□□□□□ -0.61
RNF43-203ENST00000577716 PDK4Q16654 411 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 DGKDQ16760 1214 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 AGAP9Q5VTM2 703 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 RNF43Q68DV7 783 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 VSIG10LQ86VR7 867 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 TRAPPC12Q8WVT3 735 aa11.24□□□□□ -0.61
RNF43-203ENST00000577716 GFM2Q969S9 779 aaKnown RBP11.24□□□□□ -0.61
RNF43-203ENST00000577716 FHDC1Q9C0D6 1143 aaPredicted RBP11.24□□□□□ -0.61
RNF43-203ENST00000577716 SUPT3HB4E1H0 165 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 KCNK1O00180 336 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 ACKR2O00590 384 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 WNT10BO00744 389 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 DDX3YO15523 660 aaKnown RBP11.23□□□□□ -0.61
RNF43-203ENST00000577716 MYCP01106 439 aaPredicted RBP11.23□□□□□ -0.61
RNF43-203ENST00000577716 AMPD1P23109 780 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 DSG3P32926 999 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 SLC26A2P50443 739 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 CNTN2Q02246 1040 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
RNF43-203ENST00000577716 KCNT2Q6UVM3 1135 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 SCUBE3Q8IX30 993 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 KREMEN1Q96MU8 473 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 PPP1R2P1Q96PQ5 205 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 TRIM54Q9BYV2 358 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
RNF43-203ENST00000577716 TCF7L2Q9NQB0 619 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.23□□□□□ -0.61
RNF43-203ENST00000577716 SYNPO2Q9UMS6 1093 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 DRG1Q9Y295 367 aaKnown RBP11.23□□□□□ -0.61
RNF43-203ENST00000577716 SNX13Q9Y5W8 968 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 MICAL2O94851 1124 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 TGFB3P10600 412 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 RPL22P35268 128 aaKnown RBP11.23□□□□□ -0.61
RNF43-203ENST00000577716 SLC1A6P48664 564 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 TAS2R40P59535 323 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 NOMO3P69849 1222 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 SLC15A2Q16348 729 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 LY6KQ17RY6 165 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 LRRC38Q5VT99 294 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 LLGL2Q6P1M3 1020 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 DNERQ8NFT8 737 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
RNF43-203ENST00000577716 KLHL4Q9C0H6 718 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 FAM8A1Q9UBU6 413 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 ENTPD5O75356 428 aa11.23□□□□□ -0.61
RNF43-203ENST00000577716 ETFBP38117 255 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms