RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MSANTD4Q8NCY6 345 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CMASQ8NFW8 434 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 IRGQQ8WZA9 623 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 C18orf8Q96DM3 657 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MCRS1Q96EZ8 462 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TRIM11Q96F44 468 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TRMT2BQ96GJ1 504 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NECTIN4Q96NY8 510 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PGLYRP2Q96PD5 576 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FBXO44Q9H4M3 255 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CYP4F11Q9HBI6 524 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 AVENQ9NQS1 362 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ASNSD1Q9NWL6 643 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZDHHC7Q9NXF8 308 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 STRIP2Q9ULQ0 834 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SLC27A5Q9Y2P5 690 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PCDHA13Q9Y5I0 950 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 A0A0A6YYK5 440 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 FBXO21O94952 628 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 RTN3O95197 1032 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CYP1A2P05177 515 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 H2AFZP0C0S5 128 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TMEM253P0C7T8 217 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CSH1P0DML2 217 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CSH2P0DML3 217 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SRGAP2BP0DMP2 458 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 HMGA1P17096 107 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ATF6P18850 670 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PMLP29590 882 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 MAGEA1P43355 309 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ALDH1A3P47895 512 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PPP3CCP48454 512 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 GALCP54803 685 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 HADHBP55084 474 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 GPC5P78333 572 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SPA17Q15506 151 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 DDR2Q16832 855 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 MGAT5BQ3V5L5 792 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PPP1R15BQ5SWA1 713 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PLEKHA7Q6IQ23 1121 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 DENND5BQ6ZUT9 1274 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 H2AFVQ71UI9 128 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 BHLHA9Q7RTU4 235 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 XYLT1Q86Y38 959 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PASD1Q8IV76 773 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TXLNBQ8N3L3 684 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 OVCA2Q8WZ82 227 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PSMG2Q969U7 264 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 POMKQ9H5K3 350 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LUC7LQ9NQ29 371 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SPTLC3Q9NUV7 552 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ADAM22Q9P0K1 906 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SCML2Q9UQR0 700 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 USTQ9Y2C2 406 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 INSL5Q9Y5Q6 135 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 HCFC2Q9Y5Z7 792 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PATJQ8NI35 1801 aa11.7□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SIGLEC16A6NMB1 481 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 E5RJQ4 531 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SLC30A4O14863 429 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PER2O15055 1255 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PAPSS1O43252 624 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SART1O43290 800 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 MTA2O94776 668 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 IPO7O95373 1038 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ERBB2P04626 1255 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ZDHHC11BP0C7U3 371 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TKTL1P51854 596 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 VAV2P52735 878 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 EPHA5P54756 1037 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ELMSAN1Q6PJG2 1045 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 MON1AQ86VX9 555 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 C3orf20Q8ND61 904 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 UBE2Q2Q8WVN8 375 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ZNF830Q96NB3 372 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LRRC3Q9BY71 257 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LRRC4Q9HBW1 653 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TMEM51Q9NW97 253 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 DLGAP2Q9P1A6 1054 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 NCDNQ9UBB6 729 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TMEM59LQ9UK28 342 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 YIPF1Q9Y548 306 aa11.69□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CACNA1IQ9P0X4 2223 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SLC38A8A6NNN8 435 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PRRG1O14668 218 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ZBED1O96006 694 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 C8AP07357 584 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 EPCAMP16422 314 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PSEN1P49768 467 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SLC5A3P53794 718 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 EPHB3P54753 998 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 DAOAP59103 153 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SLC6A3Q01959 620 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ITIH3Q06033 890 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TWF1Q12792 350 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms