RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 TAS2R1Q9NYW7 299 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 TIMM13Q9Y5L4 95 aaPredicted RBP15.39■□□□□ 0.05
PRPF8-216ENST00000577001 SNCAIPQ9Y6H5 919 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 NEMP1O14524 444 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 DKC1O60832 514 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRPF8-216ENST00000577001 TRUB2O95900 331 aaKnown RBP15.39■□□□□ 0.05
PRPF8-216ENST00000577001 NEK3P51956 506 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 POLE2P56282 527 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 YWHAEP62258 255 aaKnown RBP15.39■□□□□ 0.05
PRPF8-216ENST00000577001 GBP7Q8N8V2 638 aaPredicted RBP15.39■□□□□ 0.05
PRPF8-216ENST00000577001 SNX31Q8N9S9 440 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 NRG4Q8WWG1 115 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 PYDC1Q8WXC3 89 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 OXCT2Q9BYC2 517 aaPredicted RBP15.39■□□□□ 0.05
PRPF8-216ENST00000577001 AS3MTQ9HBK9 375 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 CPSF3Q9UKF6 684 aaKnown RBP15.39■□□□□ 0.05
PRPF8-216ENST00000577001 STARD13Q9Y3M8 1113 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 SNX10Q9Y5X0 201 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 ADGRA2Q96PE1 1338 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 PRR5-ARHGAP8B1AHC4 643 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 CLDN5O00501 218 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 DNAJC6O75061 913 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 ARHGAP8P85298 464 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 AP1B1Q10567 949 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 RALGPS1Q5JS13 557 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 TMEM176AQ96HP8 235 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 MARK4Q96L34 752 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 TIPINQ9BVW5 301 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 C17orf75Q9HAS0 396 aa15.39■□□□□ 0.05
PRPF8-216ENST00000577001 TXNDC9O14530 226 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 TBX10O75333 385 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 DCTN3O75935 186 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 CALB2P22676 271 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 SOX11P35716 441 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 SNX30Q5VWJ9 437 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 DCAF15Q66K64 600 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 CCDC62Q6P9F0 684 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 WDR49Q8IV35 697 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 BANPQ8N9N5 519 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 STK32AQ8WU08 396 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 STMN2Q93045 179 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 CAB39LQ9H9S4 337 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 HOXC10Q9NYD6 342 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 PSAT1Q9Y617 370 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 SIGLEC16A6NMB1 481 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 ERVK-10P10266 1014 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 SLC10A2Q12908 348 aaPredicted RBP15.38■□□□□ 0.05
PRPF8-216ENST00000577001 TCEAL1Q15170 157 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 DLG2Q15700 870 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 EFHC2Q5JST6 749 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 PCDH19Q8TAB3 1148 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 TTC25Q96NG3 672 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 SYT15Q9BQS2 421 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 SNRNP25Q9BV90 132 aaKnown RBP15.38■□□□□ 0.05
PRPF8-216ENST00000577001 ACSS3Q9H6R3 686 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 NMRK1Q9NWW6 199 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 SNTG2Q9NY99 539 aa15.38■□□□□ 0.05
PRPF8-216ENST00000577001 FARP1Q9Y4F1 1045 aaPredicted RBP15.38■□□□□ 0.05
PRPF8-216ENST00000577001 ITGAVP06756 1048 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 KRT7P08729 469 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 LMO2P25791 158 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 YWHAZP63104 245 aaKnown RBP15.37■□□□□ 0.05
PRPF8-216ENST00000577001 TCHHL1Q5QJ38 904 aaPredicted RBP15.37■□□□□ 0.05
PRPF8-216ENST00000577001 USP33Q8TEY7 942 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 SCG3Q8WXD2 468 aaKnown RBP15.37■□□□□ 0.05
PRPF8-216ENST00000577001 KLRG1Q96E93 195 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 CDHR1Q96JP9 859 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 SMG5Q9UPR3 1016 aaKnown RBP15.37■□□□□ 0.05
PRPF8-216ENST00000577001 ATP9BO43861 1147 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 PAN2Q504Q3 1202 aaKnown RBP15.37■□□□□ 0.05
PRPF8-216ENST00000577001 ANO7Q6IWH7 933 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 MPZL3Q6UWV2 235 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 PHC3Q8NDX5 983 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 NLGN2Q8NFZ4 835 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 GSC2O15499 205 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 ETS2P15036 469 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 GPD1P21695 349 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 USP4Q13107 963 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 FAM160B1Q5W0V3 765 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 BBS12Q6ZW61 710 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 PLD5Q8N7P1 536 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 DNAJC9Q8WXX5 260 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 SPATC1LQ9H0A9 340 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 KCNK13Q9HB14 408 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 PNPOQ9NVS9 261 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 TUBGCP4Q9UGJ1 667 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 SHOC2Q9UQ13 582 aa15.37■□□□□ 0.05
PRPF8-216ENST00000577001 TCRBV5S1A1TA0A578 114 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 C6orf222P0C671 652 aaPredicted RBP15.36■□□□□ 0.05
PRPF8-216ENST00000577001 ARSAP15289 507 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 GOT1P17174 413 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 ARF4P18085 180 aaPredicted RBP15.36■□□□□ 0.05
PRPF8-216ENST00000577001 GLRBP48167 497 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 ZNF132P52740 706 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 PDE1BQ01064 536 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 SLC10A6Q3KNW5 377 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 PRAMEF19Q5SWL8 479 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 CCNJLQ8IV13 435 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 CCDC185Q8N715 623 aa15.36■□□□□ 0.05
PRPF8-216ENST00000577001 GSTCDQ8NEC7 633 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms