RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TRIP6Q15654 476 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 WDR45BQ5MNZ6 344 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 EGFLAMQ63HQ2 1017 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 SLC41A1Q8IVJ1 513 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 PDILTQ8N807 584 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 XXYLT1Q8NBI6 393 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 OR2I1PQ8NGU4 316 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 SCAMP5Q8TAC9 235 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 HPS3Q969F9 1004 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 GABRG3Q99928 467 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 BBS2Q9BXC9 721 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZDHHC5Q9C0B5 715 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 FBXO44Q9H4M3 255 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 IL37Q9NZH6 218 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 GMIPQ9P107 970 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 LSM7Q9UK45 103 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 MORC2Q9Y6X9 1032 aaPredicted RBP12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 UBE4BO95155 1302 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 A0A087X0B3 334 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 FAM92AA1XBS5 289 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 SH3BP5O60239 455 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 TLR5O60602 858 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 PHACTR2O75167 634 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZDHHC11BP0C7U3 371 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 TYRP14679 529 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 HOXD13P35453 343 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 MYL6P60660 151 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 AMPD3Q01432 767 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZNF699Q32M78 642 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 HTR3DQ70Z44 454 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 MIB1Q86YT6 1006 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 NAXDQ8IW45 347 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZNF507Q8TCN5 953 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 ADAMTS14Q8WXS8 1223 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZNF419Q96HQ0 510 aaPredicted RBP12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 MRGPRX1Q96LB2 322 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 XYLT2Q9H1B5 865 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 CUEDC2Q9H467 287 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 TLR8Q9NR97 1041 aaKnown RBP12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 KRT82Q9NSB4 513 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 APOBEC2Q9Y235 224 aaKnown RBP12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 LAMA5O15230 3695 aa12.32□□□□□ -0.44
CTDNEP1-212ENST00000576613 ADAMTS20P59510 1910 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 TAF4O00268 1085 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 GFRA2O00451 464 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 TRIM24O15164 1050 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 TGFB1I1O43294 461 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 GJB3O75712 270 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 AP1G2O75843 785 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 CAPNS1P04632 268 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 FTH1P19P0C7X4 201 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 DGKGP49619 791 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 ASIC1P78348 528 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 SCAPQ12770 1279 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 BIRC3Q13489 604 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 STARD3Q14849 445 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 SLC39A14Q15043 492 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 FAM26FQ5R3K3 315 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 KIAA1324Q6UXG2 1013 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 EPM2AIP1Q7L775 607 aaPredicted RBP12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 CAMK1GQ96NX5 476 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 ACOX2Q99424 681 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 TRIM9Q9C026 710 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 CCDC86Q9H6F5 360 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 SMYD3Q9H7B4 428 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 CD248Q9HCU0 757 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 MARK1Q9P0L2 795 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 HCN2Q9UL51 889 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 NFE2L3Q9Y4A8 694 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 GPSM3Q9Y4H4 160 aa12.31□□□□□ -0.44
CTDNEP1-212ENST00000576613 MEI4A8MW99 385 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 CLIC2O15247 247 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 P4HA1P13674 534 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 CD6P30203 668 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 ATP5C1P36542 298 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZNF132P52740 706 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 AP3M2P53677 418 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 CDH8P55286 799 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 GRIK2Q13002 908 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 FAM173BQ6P4H8 233 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 TPGS1Q6ZTW0 290 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 PAQR9Q6ZVX9 377 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 FUKQ8N0W3 1084 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 WBP2Q969T9 261 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 ERLEC1Q96DZ1 483 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 KBTBD4Q9NVX7 518 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 CACNA2D2Q9NY47 1150 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 RAD54BQ9Y620 910 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 MYH10P35580 1976 aa12.3□□□□□ -0.44
CTDNEP1-212ENST00000576613 A0A1B0GTW7 788 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms