RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 HSFY1Q96LI6 401 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 VPS16Q9H269 839 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 CNGB3Q9NQW8 809 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 SPATA6Q9NWH7 488 aaPredicted RBP24.68■■□□□ 1.54
SNF8-217ENST00000576353 PATJQ8NI35 1801 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 BECN2A8MW95 431 aa24.67■■□□□ 1.54
SNF8-217ENST00000576353 TRDMT1O14717 391 aaKnown RBP24.67■■□□□ 1.54
SNF8-217ENST00000576353 THAP12O43422 761 aa24.67■■□□□ 1.54
SNF8-217ENST00000576353 GNA15P30679 374 aa24.67■■□□□ 1.54
SNF8-217ENST00000576353 PLA2G5P39877 138 aa24.67■■□□□ 1.54
SNF8-217ENST00000576353 KCNMA1Q12791 1236 aa24.67■■□□□ 1.54
SNF8-217ENST00000576353 GRSF1Q12849 480 aaKnown RBP eCLIP24.67■■□□□ 1.541e-7■■■□□ 16.4
SNF8-217ENST00000576353 PMF1Q6P1K2 205 aa24.67■■□□□ 1.54
SNF8-217ENST00000576353 CHRDQ9H2X0 955 aa24.67■■□□□ 1.54
SNF8-217ENST00000576353 NUDT5Q9UKK9 219 aa24.67■■□□□ 1.54
SNF8-217ENST00000576353 LCP1P13796 627 aa24.66■■□□□ 1.54
SNF8-217ENST00000576353 CDK11BP21127 795 aaKnown RBP24.66■■□□□ 1.54
SNF8-217ENST00000576353 RGS7P49802 495 aa24.66■■□□□ 1.54
SNF8-217ENST00000576353 PTK2Q05397 1052 aa24.66■■□□□ 1.54
SNF8-217ENST00000576353 FKBP15Q5T1M5 1219 aa24.66■■□□□ 1.54
SNF8-217ENST00000576353 BTBD8Q5XKL5 378 aa24.66■■□□□ 1.54
SNF8-217ENST00000576353 HTR3DQ70Z44 454 aa24.66■■□□□ 1.54
SNF8-217ENST00000576353 RSRC2Q7L4I2 434 aaKnown RBP24.66■■□□□ 1.54
SNF8-217ENST00000576353 SYNPOQ8N3V7 929 aa24.66■■□□□ 1.54
SNF8-217ENST00000576353 ATOH1Q92858 354 aaPredicted RBP24.66■■□□□ 1.54
SNF8-217ENST00000576353 P2RY13Q9BPV8 354 aa24.66■■□□□ 1.54
SNF8-217ENST00000576353 LSM7Q9UK45 103 aaKnown RBP24.66■■□□□ 1.54
SNF8-217ENST00000576353 FOXN3O00409 490 aaPredicted RBP24.65■■□□□ 1.54
SNF8-217ENST00000576353 SCAMP3O14828 347 aaKnown RBP24.65■■□□□ 1.54
SNF8-217ENST00000576353 LAMTOR5O43504 91 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 ADH1CP00326 375 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 IRF1P10914 325 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 GPD2P43304 727 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 COG7P83436 770 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 ANO6Q4KMQ2 910 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 TMEM196Q5HYL7 178 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 KLHDC7AQ5VTJ3 777 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 DPY19L2P1Q6NXN4 242 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 MAMSTRQ6ZN01 415 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 IRGQQ8WZA9 623 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 NDRG1Q92597 394 aaKnown RBP24.65■■□□□ 1.54
SNF8-217ENST00000576353 CHFRQ96EP1 664 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 LSM14BQ9BX40 385 aaKnown RBP24.65■■□□□ 1.54
SNF8-217ENST00000576353 OLA1Q9NTK5 396 aaKnown RBP24.65■■□□□ 1.54
SNF8-217ENST00000576353 LIMA1Q9UHB6 759 aaKnown RBP24.65■■□□□ 1.54
SNF8-217ENST00000576353 KIF26AQ9ULI4 1882 aaPredicted RBP24.65■■□□□ 1.54
SNF8-217ENST00000576353 STRIP2Q9ULQ0 834 aa24.65■■□□□ 1.54
SNF8-217ENST00000576353 MDM4O15151 490 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 FBXO21O94952 628 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 GALK1P51570 392 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 BPIFB4P59827 614 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 NCAPHQ15003 741 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 DHCR24Q15392 516 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 BSPRYQ5W0U4 402 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 DENND1BQ6P3S1 775 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 MIB1Q86YT6 1006 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 STK32AQ8WU08 396 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 BPIFA3Q9BQP9 254 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 ACP6Q9NPH0 428 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 PLCB1Q9NQ66 1216 aa24.64■■□□□ 1.54
SNF8-217ENST00000576353 AJAP1Q9UKB5 411 aaPredicted RBP24.64■■□□□ 1.54
SNF8-217ENST00000576353 LRRC10BA6NIK2 292 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 CYP17A1P05093 508 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 UCHL3P15374 230 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 ZNF18P17022 549 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 DRD1P21728 446 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 ACADSBP45954 432 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 COPB1P53618 953 aaKnown RBP24.63■■□□□ 1.53
SNF8-217ENST00000576353 DAOAP59103 153 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 EFEMP1Q12805 493 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 MTAPQ13126 283 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 RAPGEF1Q13905 1077 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 CCINQ13939 588 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 RHBDF2Q6PJF5 856 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 BHLHA9Q7RTU4 235 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 BBS7Q8IWZ6 715 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 FAM71AQ8IYT1 594 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 AOPEPQ8N6M6 819 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 RNF139Q8WU17 664 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 GOLGA1Q92805 767 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 CD101Q93033 1021 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 ST7Q9NRC1 585 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 ABCC13Q9NSE7 274 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 RBM12Q9NTZ6 932 aaKnown RBP24.63■■□□□ 1.53
SNF8-217ENST00000576353 MARCH2Q9P0N8 246 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 RASAL2Q9UJF2 1139 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 FBXO4Q9UKT5 387 aa24.63■■□□□ 1.53
SNF8-217ENST00000576353 YJEFN3A6XGL0 299 aa24.62■■□□□ 1.53
SNF8-217ENST00000576353 SMTNL1A8MU46 457 aa24.62■■□□□ 1.53
SNF8-217ENST00000576353 E7ENQ6 273 aa24.62■■□□□ 1.53
SNF8-217ENST00000576353 GABBR2O75899 941 aa24.62■■□□□ 1.53
SNF8-217ENST00000576353 RPL34P49207 117 aaKnown RBP24.62■■□□□ 1.53
SNF8-217ENST00000576353 DRAP1Q14919 205 aaPredicted RBP24.62■■□□□ 1.53
SNF8-217ENST00000576353 FSTL4Q6MZW2 842 aa24.62■■□□□ 1.53
SNF8-217ENST00000576353 WBP2Q969T9 261 aa24.62■■□□□ 1.53
SNF8-217ENST00000576353 FHOD1Q9Y613 1164 aa24.62■■□□□ 1.53
SNF8-217ENST00000576353 HELZP42694 1942 aaKnown RBP24.61■■□□□ 1.53
SNF8-217ENST00000576353 PIK3R2O00459 728 aa24.61■■□□□ 1.53
SNF8-217ENST00000576353 SART1O43290 800 aaKnown RBP24.61■■□□□ 1.53
SNF8-217ENST00000576353 GREM1O60565 184 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms