RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 RGS7P49802 495 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 NUBP1P53384 320 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 PTPN5P54829 565 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 ADIGQ0VDE8 80 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 TCF15Q12870 199 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 PON2Q15165 354 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 KRT31Q15323 416 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 STILQ15468 1287 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 CNGA2Q16280 664 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 EML3Q32P44 896 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 RAB41Q5JT25 222 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 TXNDC11Q6PKC3 985 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 SIX6OS1Q8N1H7 587 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 ATP2A3Q93084 1043 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-216ENST00000575599 ZFRQ96KR1 1074 aaKnown RBP13.94□□□□□ -0.18
RPAIN-216ENST00000575599 OSBPL6Q9BZF3 934 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 ULBP1Q9BZM6 244 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 VPS16Q9H269 839 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 ACP6Q9NPH0 428 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 CYLDQ9NQC7 956 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 DLGAP2Q9P1A6 1054 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 DNAJC12Q9UKB3 198 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 CNTN6Q9UQ52 1028 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 SH3BP1Q9Y3L3 701 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 H0Y858 1186 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 PIK3R2O00459 728 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 THAP12O43422 761 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 SERPINC1P01008 464 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 RALAP11233 206 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 LCP1P13796 627 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 GNA15P30679 374 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 ATP5C1P36542 298 aaKnown RBP13.93□□□□□ -0.18
RPAIN-216ENST00000575599 PSEN1P49768 467 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 MLLT6P55198 1093 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-216ENST00000575599 NCAPHQ15003 741 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 PKDCCQ504Y2 493 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 C10orf120Q5SQS8 335 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 C1orf228Q6PIY5 440 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 SCD5Q86SK9 330 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 NDRG1Q92597 394 aaKnown RBP13.93□□□□□ -0.18
RPAIN-216ENST00000575599 LSM14BQ9BX40 385 aaKnown RBP13.93□□□□□ -0.18
RPAIN-216ENST00000575599 LINC00597Q9H2U6 94 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 ECT2Q9H8V3 914 aa13.93□□□□□ -0.18
RPAIN-216ENST00000575599 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.93□□□□□ -0.18
RPAIN-216ENST00000575599 SPATA6Q9NWH7 488 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-216ENST00000575599 ARIH1Q9Y4X5 557 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-216ENST00000575599 MED7O43513 233 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 NFATC1O95644 943 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 ZBED1O96006 694 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 PNMA6AP0CW24 399 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-216ENST00000575599 YWHAGP61981 247 aaKnown RBP eCLIP13.92□□□□□ -0.18
RPAIN-216ENST00000575599 GOLGA8FQ08AF8 430 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 GOLGA8DPQ0D2H9 430 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 KCNMA1Q12791 1236 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 RAPGEF1Q13905 1077 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 ANGPT1Q15389 498 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 PMF1Q6P1K2 205 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 RSRC2Q7L4I2 434 aaKnown RBP13.92□□□□□ -0.18
RPAIN-216ENST00000575599 TADA2BQ86TJ2 420 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 MIB1Q86YT6 1006 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 ZNF687Q8N1G0 1237 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 ARHGAP18Q8N392 663 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 KCTD13Q8WZ19 329 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 SHC3Q92529 594 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 LMAN1LQ9HAT1 526 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 RBM12Q9NTZ6 932 aaKnown RBP13.92□□□□□ -0.18
RPAIN-216ENST00000575599 RASAL2Q9UJF2 1139 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 DNMT3LQ9UJW3 386 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 FHOD1Q9Y613 1164 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 F5P12259 2224 aa13.92□□□□□ -0.18
RPAIN-216ENST00000575599 E2F8A0AVK6 867 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 SLC9A3R1O14745 358 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-216ENST00000575599 GJA4P35212 333 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 MAGEA9P43362 315 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 AMPD2Q01433 879 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 EFEMP1Q12805 493 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 NR1H3Q13133 447 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 FZD5Q13467 585 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 FILIP1LQ4L180 1135 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 FKBP15Q5T1M5 1219 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-216ENST00000575599 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 SLC35F5Q8WV83 523 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 WBP2Q969T9 261 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 CLDN23Q96B33 292 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 FAM122AQ96E09 287 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 CHFRQ96EP1 664 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 CDK5RAP1Q96SZ6 601 aaKnown RBP13.91□□□□□ -0.18
RPAIN-216ENST00000575599 KLF16Q9BXK1 252 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-216ENST00000575599 ST7Q9NRC1 585 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 FAM86C1Q9NVL1 165 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 CLIC5Q9NZA1 410 aa13.91□□□□□ -0.18
RPAIN-216ENST00000575599 MUC6Q6W4X9 2439 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 CBFA2T2O43439 604 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 CYP17A1P05093 508 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 TPM3P06753 285 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 CHRNB1P11230 501 aa13.9□□□□□ -0.18
RPAIN-216ENST00000575599 RPS9P46781 194 aaKnown RBP13.9□□□□□ -0.18
RPAIN-216ENST00000575599 KLK7P49862 253 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms