RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 E5RJQ4 531 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 GABBR2O75899 941 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 LTFP02788 710 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 MMEP08473 750 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 CFHP08603 1231 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 GLULP15104 373 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 TNFAIP3P21580 790 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 GDI1P31150 447 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 SCNN1AP37088 669 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 GABRB2P47870 512 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 YWHAZP63104 245 aaKnown RBP10.02□□□□□ -0.81
CCDC40-214ENST00000575431 NOMO3P69849 1222 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 ARID5AQ03989 594 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 PRKCQQ04759 706 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 USP4Q13107 963 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 MTF1Q14872 753 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
CCDC40-214ENST00000575431 C10orf120Q5SQS8 335 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 TAF3Q5VWG9 929 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 TRIM67Q6ZTA4 783 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 IRF2BP2Q7Z5L9 587 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 VPS36Q86VN1 386 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 PASD1Q8IV76 773 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 DRC7Q8IY82 874 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 CSGALNACT1Q8TDX6 532 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 SH3RF2Q8TEC5 729 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 OTUB2Q96DC9 234 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 SHDQ96IW2 340 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 SLC22A12Q96S37 553 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 AGPAT1Q99943 283 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 C1QTNF1Q9BXJ1 281 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 PLA2G2FQ9BZM2 168 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 WDR35Q9P2L0 1181 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 LSM7Q9UK45 103 aaKnown RBP10.02□□□□□ -0.81
CCDC40-214ENST00000575431 SH3BP1Q9Y3L3 701 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 CPQQ9Y646 472 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 MYO10Q9HD67 2058 aa10.02□□□□□ -0.81
CCDC40-214ENST00000575431 YJEFN3A6XGL0 299 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 E7ENQ6 273 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 LEFTY2O00292 366 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 CAPN9O14815 690 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 PAPSS1O43252 624 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-214ENST00000575431 HSF2BPO75031 334 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 NSFP46459 744 aaKnown RBP10.01□□□□□ -0.81
CCDC40-214ENST00000575431 IFNAR2P48551 515 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 FMO1Q01740 532 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 SLC6A3Q01959 620 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 CENPCQ03188 943 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 KLHL30Q0D2K2 578 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 NR1H3Q13133 447 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 MTA1Q13330 715 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 ZNF77Q15935 545 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 MSANTD2Q6P1R3 559 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 BHLHA9Q7RTU4 235 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 BMP8AQ7Z5Y6 402 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 VSTM4Q8IW00 320 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 SLC20A1Q8WUM9 679 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 OSCP1Q8WVF1 389 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 EXOC4Q96A65 974 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 RSPRY1Q96DX4 576 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 MRFAP1L1Q96HT8 127 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 CPXM1Q96SM3 734 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 NELL2Q99435 816 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 FAM83CQ9BQN1 747 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 KLF16Q9BXK1 252 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-214ENST00000575431 DCLK3Q9C098 648 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 SMG9Q9H0W8 520 aaKnown RBP10.01□□□□□ -0.81
CCDC40-214ENST00000575431 POPDC2Q9HBU9 364 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 GKN1Q9NS71 199 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 OSER1Q9NX31 292 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 DUS2Q9NX74 493 aaKnown RBP10.01□□□□□ -0.81
CCDC40-214ENST00000575431 RRN3Q9NYV6 651 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 MARCH2Q9P0N8 246 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 CYTH4Q9UIA0 394 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 FBXL21Q9UKT6 434 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 CCL26Q9Y258 94 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 ZNF510Q9Y2H8 683 aa10.01□□□□□ -0.81
CCDC40-214ENST00000575431 HBS1LQ9Y450 684 aaKnown RBP10.01□□□□□ -0.81
CCDC40-214ENST00000575431 REV3LO60673 3130 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 PIK3R2O00459 728 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 MAN2B1O00754 1011 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 NARSO43776 548 aaKnown RBP10□□□□□ -0.81
CCDC40-214ENST00000575431 NFATC1O95644 943 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 TBX18O95935 607 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 GYPCP04921 128 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 SERPING1P05155 500 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 CALB1P05937 261 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 GZMAP12544 262 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 UNGP13051 313 aaPredicted RBP10□□□□□ -0.81
CCDC40-214ENST00000575431 NCAM1P13591 858 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 CHRNB2P17787 502 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 MMP8P22894 467 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 HNRNPH3P31942 346 aaKnown RBP10□□□□□ -0.81
CCDC40-214ENST00000575431 CASP14P31944 242 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 PGFP49763 221 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 RING1Q06587 406 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 EFEMP1Q12805 493 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 NNTQ13423 1086 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 RUNX3Q13761 415 aa10□□□□□ -0.81
CCDC40-214ENST00000575431 GRM2Q14416 872 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms