RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ALPK1Q96QP1 1244 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 NACC1Q96RE7 527 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 FERD3LQ96RJ6 166 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 TSEN34Q9BSV6 310 aaKnown RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC6A16Q9GZN6 736 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 SNTG2Q9NY99 539 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 APPL1Q9UKG1 709 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 CNOT11Q9UKZ1 510 aaKnown RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 PCDHA4Q9UN74 947 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 POLIQ9UNA4 740 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 AP4B1Q9Y6B7 739 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 SPATA31A3Q5VYP0 1347 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 ZNF609O15014 1411 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 USP6P35125 1406 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 A0A0A6YYK5 440 aaPredicted RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 KLF18A0A0U1RQI7 1052 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 F8W810 466 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 MUSKO15146 869 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 CCNT2O60583 730 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 IDH1O75874 414 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 FGF18O76093 207 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 ECDO95905 644 aaPredicted RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 KRT7P08729 469 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 PSMA3P25788 255 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 PEX2P28328 305 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 CHRNA3P32297 505 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 AFMP43652 599 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 PHKA1P46020 1223 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SLCO1A2P46721 670 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 MMP16P51512 607 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 PLTPP55058 493 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 YWHAGP61981 247 aaKnown RBP eCLIP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 POLR2GP62487 172 aaKnown RBP eCLIP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 CYP4F2P78329 520 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 FKBP4Q02790 459 aaKnown RBP eCLIP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 ZBTB16Q05516 673 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 CYP4F3Q08477 520 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 KLHL30Q0D2K2 578 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 CDC20Q12834 499 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 CALCOCO2Q13137 446 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 NCOA4Q13772 614 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 UBE4AQ14139 1066 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 OASLQ15646 514 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC18A3Q16572 532 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 GRAMD1BQ3KR37 738 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 FBXO43Q4G163 708 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 ARSHQ5FYA8 562 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 EARS2Q5JPH6 523 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 PPM1LQ5SGD2 360 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 TTBK2Q6IQ55 1244 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 GSTA5Q7RTV2 222 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 MRPL10Q7Z7H8 261 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 JAMLQ86YT9 394 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SMYD4Q8IYR2 804 aaPredicted RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 TCAIMQ8N3R3 496 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC22A8Q8TCC7 542 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 FBXO25Q8TCJ0 367 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 C12orf43Q96C57 262 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 ZNF347Q96SE7 839 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 AP1M1Q9BXS5 423 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 ZNF717Q9BY31 904 aaPredicted RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 ZFYVE28Q9HCC9 887 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 WDR6Q9NNW5 1121 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 HMG20AQ9NP66 347 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SSU72Q9NP77 194 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 GIMAP4Q9NUV9 329 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 KCTD5Q9NXV2 234 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 VPS54Q9P1Q0 977 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC7A8Q9UHI5 535 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SNX7Q9UNH6 387 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 PLA2G4CQ9UP65 541 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 EIF3LQ9Y262 564 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 GPSM3Q9Y4H4 160 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 ZHX2Q9Y6X8 837 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 MAP2P11137 1827 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 EMSYQ7Z589 1322 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 PCDH11YQ9BZA8 1340 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 CPDO75976 1380 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 TNS3Q68CZ2 1445 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 A0A087WXM4 84 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 A0A1W2PRG0 241 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 LRRIQ4A6NIV6 560 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 HNRNPCL2B2RXH8 293 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 TRIM77I1YAP6 450 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 DYRK3O43781 588 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 MAFO75444 373 aaPredicted RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 USP1O94782 785 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 EPN2O95208 641 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 H6PDO95479 791 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 CRTAMO95727 393 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 GGPS1O95749 300 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 GH1P01241 217 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 PLEKP08567 350 aaPredicted RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SNRPAP09012 282 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 HMOX1P09601 288 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 ZBTB48P10074 688 aaPredicted RBP8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 GFAPP14136 432 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 DCKP27707 260 aa8.24□□□□□ -1.09
TOM1L1-220ENST00000575333 SERPINB1P30740 379 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms