RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 ARL4CP56559 192 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 RTP1P59025 263 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 BTKQ06187 659 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 LCA5Q86VQ0 697 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 BRSK2Q8IWQ3 736 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 SLC25A41Q8N5S1 370 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 MSL3Q8N5Y2 521 aaKnown RBP7.85□□□□□ -1.15
RPA1-207ENST00000574049 ALKBH8Q96BT7 664 aaKnown RBP7.85□□□□□ -1.15
RPA1-207ENST00000574049 HDAC11Q96DB2 347 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 RBM41Q96IZ5 413 aaKnown RBP7.85□□□□□ -1.15
RPA1-207ENST00000574049 GANQ9H2C0 597 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 SLITRK6Q9H5Y7 841 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 SARS2Q9NP81 518 aaKnown RBP7.85□□□□□ -1.15
RPA1-207ENST00000574049 PCDH12Q9NPG4 1184 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 BATF3Q9NR55 127 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 CHST7Q9NS84 486 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 DPP3Q9NY33 737 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 ANKRD12Q6UB98 2062 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 F8VP50 259 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 C2CD2LO14523 706 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 CALB1P05937 261 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 HNRNPCP07910 306 aaKnown RBP eCLIP7.85□□□□□ -1.15
RPA1-207ENST00000574049 ABCD1P33897 745 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 CUL2Q13617 745 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 HIF1AQ16665 826 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 ANO4Q32M45 955 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 MARCH8Q5T0T0 291 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 MROH9Q5TGP6 573 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 SLC9A9Q8IVB4 645 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 BBOF1Q8ND07 529 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 OR6P1Q8NGX9 317 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 SGF29Q96ES7 293 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 SNF8Q96H20 258 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 PDZD7Q9H5P4 517 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 ACSS2Q9NR19 701 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 CISHQ9NSE2 258 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 IP6K2Q9UHH9 426 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 TNFSF13BQ9Y275 285 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 KIAA1217Q5T5P2 1943 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 PAPPA2Q9BXP8 1791 aa7.85□□□□□ -1.15
RPA1-207ENST00000574049 DFFAO00273 331 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 GPC4O75487 556 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 DGKIO75912 1065 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 ENDOD1O94919 500 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 MT-CO1P00395 513 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 ENO1P06733 434 aaKnown RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 TBXAS1P24557 533 aaPredicted RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 COILP38432 576 aaPredicted RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 ABCG1P45844 678 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 ALDH18A1P54886 795 aaKnown RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 CUL3Q13618 768 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 PCSK7Q16549 785 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 QPCTQ16769 361 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 PLEKHG6Q3KR16 790 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 PREPLQ4J6C6 727 aaPredicted RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 C10orf62Q5T681 223 aaPredicted RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 HEATR6Q6AI08 1181 aaKnown RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 TAF2Q6P1X5 1199 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 CROCCP2Q86T23 111 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 CCDC117Q8IWD4 279 aaPredicted RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 SCUBE3Q8IX30 993 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 TMC2Q8TDI7 906 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 CDKL2Q92772 493 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 PPWD1Q96BP3 646 aaKnown RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 SCLYQ96I15 445 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 CGRRF1Q99675 332 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 PPCSQ9HAB8 311 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 ASNSD1Q9NWL6 643 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 LRFN2Q9ULH4 789 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 MEIS3P2A8K0S8 358 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 PHF2O75151 1096 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 ZCCHC18P0CG32 403 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 CREB1P16220 341 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 ACO1P21399 889 aaKnown RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 RFC1P35251 1148 aaPredicted RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 MLH1P40692 756 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 MRPS6P82932 125 aaKnown RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 IL1RL1Q01638 556 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 SURF1Q15526 300 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 MEI1Q5TIA1 1274 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 SLC27A1Q6PCB7 646 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 MMGT1Q8N4V1 131 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 BEST2Q8NFU1 509 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 PGBD4Q96DM1 585 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 KREMEN1Q96MU8 473 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 PHOX2BQ99453 314 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 ZSWIM1Q9BR11 485 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 MAF1Q9H063 256 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 VCX3BQ9H321 246 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 FZD8Q9H461 694 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 VCX3AQ9NNX9 186 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 ZNF646O15015 1829 aaPredicted RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 ZBBXA8MT70 800 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 B3GAT3O94766 335 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 SKIP12755 728 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 EIF3BP55884 814 aaKnown RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 CDR2Q01850 454 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 CRELD2Q6UXH1 353 aaPredicted RBP7.84□□□□□ -1.15
RPA1-207ENST00000574049 B4GALNT2Q8NHY0 566 aa7.84□□□□□ -1.15
RPA1-207ENST00000574049 CDC26Q8NHZ8 85 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms