RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 GOLGA1Q92805 767 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 IRF7Q92985 503 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 USP13Q92995 863 aaPredicted RBP11.58□□□□□ -0.56
CHD3-216ENST00000573936 CYP2S1Q96SQ9 504 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 RPP25Q9BUL9 199 aaKnown RBP11.58□□□□□ -0.56
CHD3-216ENST00000573936 MIS12Q9H081 205 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 BRD9Q9H8M2 597 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 TRPV5Q9NQA5 729 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 ST7Q9NRC1 585 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 OLA1Q9NTK5 396 aaKnown RBP11.58□□□□□ -0.56
CHD3-216ENST00000573936 IFNKQ9P0W0 207 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 WNT16Q9UBV4 365 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 NAGPAQ9UK23 515 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 GREB1Q4ZG55 1949 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 COCHO43405 550 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 NARSO43776 548 aaKnown RBP11.57□□□□□ -0.56
CHD3-216ENST00000573936 PRAMEF12O95522 483 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 LSM8O95777 96 aaKnown RBP11.57□□□□□ -0.56
CHD3-216ENST00000573936 FERP16591 822 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 AOC1P19801 751 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 GDI1P31150 447 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 DAOAP59103 153 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 GPC5P78333 572 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 GOLGA8FQ08AF8 430 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 GOLGA8DPQ0D2H9 430 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 FCHO2Q0JRZ9 810 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 GRM2Q14416 872 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 CC2D1AQ6P1N0 951 aaPredicted RBP11.57□□□□□ -0.56
CHD3-216ENST00000573936 TRIM72Q6ZMU5 477 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 SCD5Q86SK9 330 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 TMEM110Q86TL2 294 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 GPIHBP1Q8IV16 184 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 SIX5Q8N196 739 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 ST13P5Q8NFI4 369 aaPredicted RBP11.57□□□□□ -0.56
CHD3-216ENST00000573936 EPS8L1Q8TE68 723 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 SH3RF2Q8TEC5 729 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 DDX1Q92499 740 aaKnown RBP11.57□□□□□ -0.56
CHD3-216ENST00000573936 DNASE1L2Q92874 299 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 HINFPQ9BQA5 517 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 TRIM62Q9BVG3 475 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 SLC4A5Q9BY07 1137 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 RNF38Q9H0F5 515 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 SMG9Q9H0W8 520 aaKnown RBP11.57□□□□□ -0.56
CHD3-216ENST00000573936 NUCKS1Q9H1E3 243 aaKnown RBP11.57□□□□□ -0.56
CHD3-216ENST00000573936 CCSER2Q9H7U1 834 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 NMUR1Q9HB89 426 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 ABCC13Q9NSE7 274 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD3-216ENST00000573936 DNMT3LQ9UJW3 386 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.57□□□□□ -0.566e-8■■■■□ 24.1
CHD3-216ENST00000573936 CPQQ9Y646 472 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 EP300Q09472 2414 aaPredicted RBP11.57□□□□□ -0.56
CHD3-216ENST00000573936 DOCK6Q96HP0 2047 aa11.57□□□□□ -0.56
CHD3-216ENST00000573936 A0A1W2PQJ5 194 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 LEFTY2O00292 366 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 SLC9A3R1O14745 358 aaPredicted RBP11.56□□□□□ -0.56
CHD3-216ENST00000573936 LMNAP02545 664 aaKnown RBP11.56□□□□□ -0.56
CHD3-216ENST00000573936 CFHP08603 1231 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 CDH5P33151 784 aaPredicted RBP11.56□□□□□ -0.56
CHD3-216ENST00000573936 PBX1P40424 430 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 COG7P83436 770 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 CDR2Q01850 454 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 USP4Q13107 963 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 PDCLQ13371 301 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 MTF1Q14872 753 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 ZNF77Q15935 545 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 C10orf120Q5SQS8 335 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 TAF3Q5VWG9 929 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 BSPRYQ5W0U4 402 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 RSRC2Q7L4I2 434 aaKnown RBP11.56□□□□□ -0.56
CHD3-216ENST00000573936 NOP9Q86U38 636 aaKnown RBP11.56□□□□□ -0.56
CHD3-216ENST00000573936 PASD1Q8IV76 773 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 CCDC105Q8IYK2 499 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 WDTC1Q8N5D0 677 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 DTWD2Q8NBA8 298 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 CSGALNACT1Q8TDX6 532 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 IPO4Q8TEX9 1081 aaKnown RBP11.56□□□□□ -0.56
CHD3-216ENST00000573936 RNF139Q8WU17 664 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 RSPRY1Q96DX4 576 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 SHDQ96IW2 340 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 PPP1R13BQ96KQ4 1090 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 SLC22A12Q96S37 553 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 XPO4Q9C0E2 1151 aaKnown RBP11.56□□□□□ -0.56
CHD3-216ENST00000573936 SEMA4AQ9H3S1 761 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 OSER1Q9NX31 292 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 STRIP2Q9ULQ0 834 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 CCL26Q9Y258 94 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 ITIH6Q6UXX5 1313 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 PATJQ8NI35 1801 aa11.56□□□□□ -0.56
CHD3-216ENST00000573936 E2F8A0AVK6 867 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 E5RJQ4 531 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 PI15O43692 258 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 LTFP02788 710 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 GLI1P08151 1106 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 MMEP08473 750 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 GLULP15104 373 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 PGFP49763 221 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 MLLT6P55198 1093 aaPredicted RBP11.55□□□□□ -0.56
CHD3-216ENST00000573936 ARID5AQ03989 594 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms