RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 TRIM65Q6PJ69 517 aa15.3■□□□□ 0.04
LITAF-208ENST00000571627 BBS7Q8IWZ6 715 aa15.3■□□□□ 0.04
LITAF-208ENST00000571627 NDRG1Q92597 394 aaKnown RBP15.3■□□□□ 0.04
LITAF-208ENST00000571627 ULBP1Q9BZM6 244 aa15.3■□□□□ 0.04
LITAF-208ENST00000571627 POLR3BQ9NW08 1133 aaPredicted RBP15.3■□□□□ 0.04
LITAF-208ENST00000571627 GTPBP10A4D1E9 387 aaKnown RBP15.29■□□□□ 0.04
LITAF-208ENST00000571627 ANTXRLA6NF34 631 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 M0QYV0 167 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 RNF40O75150 1001 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 LETM1O95202 739 aaPredicted RBP15.29■□□□□ 0.04
LITAF-208ENST00000571627 KRT5P13647 590 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 SLC9A1P19634 815 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 ZNF132P52740 706 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 DMWDQ09019 674 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 ADIGQ0VDE8 80 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 KLHL40Q2TBA0 621 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 PKDCCQ504Y2 493 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 LY6G5CQ5SRR4 150 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 CAVIN1Q6NZI2 390 aaKnown RBP15.29■□□□□ 0.04
LITAF-208ENST00000571627 RHBDF2Q6PJF5 856 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 MAMSTRQ6ZN01 415 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 C12orf40Q86WS4 652 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 MIB1Q86YT6 1006 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 SFTPA1Q8IWL2 248 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 KIAA1958Q8N8K9 716 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 NELL1Q92832 810 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 FAM81BQ96LP2 452 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 UBXN6Q9BZV1 441 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 LRRC4Q9HBW1 653 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 UBE2TQ9NPD8 197 aaPredicted RBP15.29■□□□□ 0.04
LITAF-208ENST00000571627 ZSCAN32Q9NX65 697 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 TBC1D14Q9P2M4 693 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 DNMT3LQ9UJW3 386 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 KIAA1257Q9ULG3 409 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
LITAF-208ENST00000571627 NFE2L3Q9Y4A8 694 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 EP300Q09472 2414 aaPredicted RBP15.29■□□□□ 0.04
LITAF-208ENST00000571627 GVINP1Q7Z2Y8 2422 aa15.29■□□□□ 0.04
LITAF-208ENST00000571627 GPR179Q6PRD1 2367 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 PTPRZ1P23471 2315 aaPredicted RBP15.28■□□□□ 0.04
LITAF-208ENST00000571627 OTOGLQ3ZCN5 2332 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 K7ESF4 209 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 PIK3R2O00459 728 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 GREM1O60565 184 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 ZBED1O96006 694 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 SETSIPP0DME0 302 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 RALAP11233 206 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 ADH5P11766 374 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 DRD1P21728 446 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 EEF1GP26641 437 aaKnown RBP15.28■□□□□ 0.04
LITAF-208ENST00000571627 PLA2G4AP47712 749 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 SLC6A11P48066 632 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 PSEN1P49768 467 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 RGS7P49802 495 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 YWHAGP61981 247 aaKnown RBP eCLIP15.28■□□□□ 0.04
LITAF-208ENST00000571627 MESP2Q0VG99 397 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 EFEMP1Q12805 493 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 PPP2R5DQ14738 602 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 LCLAT1Q6UWP7 414 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 GBP6Q6ZN66 633 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 BHLHA9Q7RTU4 235 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 SYNPOQ8N3V7 929 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 ZBTB44Q8NCP5 570 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 ATRIPQ8WXE1 791 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 SECISBP2LQ93073 1101 aaKnown RBP15.28■□□□□ 0.04
LITAF-208ENST00000571627 TUBGCP2Q9BSJ2 902 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 NAT10Q9H0A0 1025 aaKnown RBP15.28■□□□□ 0.04
LITAF-208ENST00000571627 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 RASAL2Q9UJF2 1139 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 PCDHGA2Q9Y5H1 932 aa15.28■□□□□ 0.04
LITAF-208ENST00000571627 EML5Q05BV3 1969 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 KCNJ18B7U540 433 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 GABBR2O75899 941 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 ADH1CP00326 375 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.04
LITAF-208ENST00000571627 HMBSP08397 361 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 LCP1P13796 627 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 SEC13P55735 322 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 KDSRQ06136 332 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 TYRO3Q06418 890 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 GOLGA8FQ08AF8 430 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 GOLGA8DPQ0D2H9 430 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 KCNJ12Q14500 433 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 EXOC3L4Q17RC7 722 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 VWA3BQ502W6 1294 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 TCP11X2Q5H9J9 407 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 HEATR6Q6AI08 1181 aaKnown RBP15.27■□□□□ 0.04
LITAF-208ENST00000571627 SMYD5Q6GMV2 418 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 PM20D1Q6GTS8 502 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 PMF1Q6P1K2 205 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 KLHDC10Q6PID8 442 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 ENOSF1Q7L5Y1 443 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 SIX6OS1Q8N1H7 587 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 RPLP0P6Q8NHW5 317 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 EXOC4Q96A65 974 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 OTUB2Q96DC9 234 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 ACP6Q9NPH0 428 aa15.27■□□□□ 0.04
LITAF-208ENST00000571627 SAMSN1Q9NSI8 373 aaKnown RBP15.27■□□□□ 0.04
LITAF-208ENST00000571627 AJAP1Q9UKB5 411 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms