RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GIPC2Q8TF65 315 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 GATA6Q92908 595 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 PCED1BQ96HM7 432 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 KREMEN1Q96MU8 473 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 PKMYT1Q99640 499 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 B3GNT5Q9BYG0 378 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 DUSP15Q9H1R2 295 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-205ENST00000571028 SIX2Q9NPC8 291 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 AJAP1Q9UKB5 411 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-205ENST00000571028 TSC2P49815 1807 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 BCLAF3A2AJT9 711 aaKnown RBP14.07□□□□□ -0.16
CCDC40-205ENST00000571028 LRRC10BA6NIK2 292 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 RNF40O75150 1001 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
CCDC40-205ENST00000571028 HAPLN1P10915 354 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-205ENST00000571028 GABRR2P28476 465 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 RAD23BP54727 409 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 UBASH3AP57075 661 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 MAPRE1Q15691 268 aaKnown RBP14.07□□□□□ -0.16
CCDC40-205ENST00000571028 TAF12Q16514 161 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 DDR2Q16832 855 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 UAP1L1Q3KQV9 507 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 FAM171BQ6P995 826 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 C4orf50Q6ZRC1 276 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 C11orf74Q86VG3 221 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 GAS2L3Q86XJ1 694 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 RBBP8NLQ8NC74 664 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-205ENST00000571028 MYCBPAPQ8TBZ2 947 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 SPPL2BQ8TCT7 592 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 JAKMIP2Q96AA8 810 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 TMEM176AQ96HP8 235 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 TMEM121BQ9BXQ6 578 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-205ENST00000571028 ZNF518BQ9C0D4 1074 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 DNAI2Q9GZS0 605 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 RBSNQ9H1K0 784 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 SLC32A1Q9H598 525 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
CCDC40-205ENST00000571028 IFNKQ9P0W0 207 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 APEX2Q9UBZ4 518 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 WASF3Q9UPY6 502 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 ASB3Q9Y575 518 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 FHOD1Q9Y613 1164 aa14.07□□□□□ -0.16
CCDC40-205ENST00000571028 IGF2RP11717 2491 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 RNF225M0QZC1 329 aaPredicted RBP14.06□□□□□ -0.16
CCDC40-205ENST00000571028 DCLK1O15075 740 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 APBB3O95704 486 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 PNMA6AP0CW24 399 aaPredicted RBP14.06□□□□□ -0.16
CCDC40-205ENST00000571028 GRIK1P39086 918 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 TUFMP49411 452 aaKnown RBP14.06□□□□□ -0.16
CCDC40-205ENST00000571028 POLR2FP61218 127 aaKnown RBP14.06□□□□□ -0.16
CCDC40-205ENST00000571028 GCNT1Q02742 428 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 SMARCB1Q12824 385 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 VEPH1Q14D04 833 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 TMEM196Q5HYL7 178 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 KLHDC7AQ5VTJ3 777 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 FSTL4Q6MZW2 842 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 FAM35AQ86V20 835 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 CRYBG2Q8N1P7 616 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 TTC39CQ8N584 583 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 NEK11Q8NG66 645 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 SLC2A14Q8TDB8 520 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 FAXDC2Q96IV6 333 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 LRRC3BQ96PB8 259 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 LRRC3Q9BY71 257 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 NLRC4Q9NPP4 1024 aa14.06□□□□□ -0.16
CCDC40-205ENST00000571028 EPHB6O15197 1021 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 PRAMEF12O95522 483 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 ACO1P21399 889 aaKnown RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 DRD1P21728 446 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 BRD2P25440 801 aaKnown RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 ANXA13P27216 316 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 RDXP35241 583 aaKnown RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 DGKEP52429 567 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 RUNX3Q13761 415 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 DRAP1Q14919 205 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 CC2D1AQ6P1N0 951 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 GAREM2Q75VX8 874 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 CYP2U1Q7Z449 544 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 DNAJB7Q7Z6W7 309 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 UBR7Q8N806 425 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 DEFB124Q8NES8 71 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 PSMG2Q969U7 264 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 ACDQ96AP0 544 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 CYFIP2Q96F07 1278 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 TASP1Q9H6P5 420 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 GKN1Q9NS71 199 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 KRT82Q9NSB4 513 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 MAGED2Q9UNF1 606 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 SIK3Q9Y2K2 1263 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 NEUROG3Q9Y4Z2 214 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 ATP8B3O60423 1300 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 PKD1L2Q7Z442 2459 aa14.05□□□□□ -0.16
CCDC40-205ENST00000571028 FASNP49327 2511 aaKnown RBP14.05□□□□□ -0.16
CCDC40-205ENST00000571028 A0A1B0GTH6 734 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 FOXN3O00409 490 aaPredicted RBP14.04□□□□□ -0.16
CCDC40-205ENST00000571028 TRDMT1O14717 391 aaKnown RBP14.04□□□□□ -0.16
CCDC40-205ENST00000571028 HYAL3O43820 417 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms