RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 EHBP1Q8NDI1 1231 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 USP33Q8TEY7 942 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 RUBCNQ92622 972 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 EXOC4Q96A65 974 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 CNOT6LQ96LI5 555 aaKnown RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 NT5C1BQ96P26 610 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 HHIPQ96QV1 700 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 HINFPQ9BQA5 517 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 UBXN6Q9BZV1 441 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 DNAI2Q9GZS0 605 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 NACA2Q9H009 215 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 INTS2Q9H0H0 1204 aaKnown RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 CLSTN2Q9H4D0 955 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 FAM124BQ9H5Z6 455 aaPredicted RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 PARD6AQ9NPB6 346 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 TBC1D14Q9P2M4 693 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 RWDD2AQ9UIY3 292 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 NAGPAQ9UK23 515 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 TSPAN16Q9UKR8 245 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 SLC8A2Q9UPR5 921 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHD3-212ENST00000570758 ATG2BQ96BY7 2078 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 MYH10P35580 1976 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 GPR179Q6PRD1 2367 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 MYOFQ9NZM1 2061 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 PIK3R2O00459 728 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ATG13O75143 517 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 TULP3O75386 442 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 STC2O76061 302 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 KAT7O95251 611 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ZBED1O96006 694 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 KLKB1P03952 638 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 APODP05090 189 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 HMBSP08397 361 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 PAEPP09466 180 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 RALAP11233 206 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 TGM1P22735 817 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ANP32AP39687 249 aaKnown RBP5.68□□□□□ -1.5
CHD3-212ENST00000570758 EIF2DP41214 584 aaKnown RBP5.68□□□□□ -1.5
CHD3-212ENST00000570758 KIR2DL1P43626 348 aaPredicted RBP5.68□□□□□ -1.5
CHD3-212ENST00000570758 PLA2G4AP47712 749 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 RGS7P49802 495 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 TKTL1P51854 596 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 BCAT1P54687 386 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 YWHAGP61981 247 aaKnown RBP eCLIP5.68□□□□□ -1.5
CHD3-212ENST00000570758 APBA1Q02410 837 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 GAD2Q05329 585 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ADIGQ0VDE8 80 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 BST2Q10589 180 aaKnown RBP5.68□□□□□ -1.5
CHD3-212ENST00000570758 EFEMP1Q12805 493 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 SIM2Q14190 667 aaPredicted RBP5.68□□□□□ -1.5
CHD3-212ENST00000570758 CNGA2Q16280 664 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ANO4Q32M45 955 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 C2orf27AQ580R0 203 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 EMC10Q5UCC4 262 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 PM20D1Q6GTS8 502 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 GJB7Q6PEY0 223 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 LCLAT1Q6UWP7 414 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 PRR23BQ6ZRT6 265 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 CLEC17AQ6ZS10 378 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 SYT13Q7L8C5 426 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 MIB1Q86YT6 1006 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ZNF276Q8N554 614 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 CCDC33Q8N5R6 958 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 MLKLQ8NB16 471 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 SECISBP2LQ93073 1101 aaKnown RBP5.68□□□□□ -1.5
CHD3-212ENST00000570758 OTUB2Q96DC9 234 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 PNKPQ96T60 521 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 CRACR2AQ9BSW2 395 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 LRRC4Q9HBW1 653 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ZDHHC4Q9NPG8 344 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ARHGEF4Q9NR80 690 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 SPHK2Q9NRA0 654 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 LMBRD1Q9NUN5 540 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 CLIC5Q9NZA1 410 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 NCDNQ9UBB6 729 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 RASAL2Q9UJF2 1139 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 DNMT3LQ9UJW3 386 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 HCN2Q9UL51 889 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 KIAA1257Q9ULG3 409 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.68□□□□□ -1.5
CHD3-212ENST00000570758 KIAA1549LQ6ZVL6 1849 aa5.68□□□□□ -1.5
CHD3-212ENST00000570758 ZFHX2Q9C0A1 2572 aaPredicted RBP5.68□□□□□ -1.5
CHD3-212ENST00000570758 FAM186AA6NE01 2351 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 PTPRZ1P23471 2315 aaPredicted RBP5.67□□□□□ -1.5
CHD3-212ENST00000570758 A0A0A0MRY4 1105 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 CCDC163A0A0D9SF12 145 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 SLC12A8A0AV02 714 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 YJEFN3A6XGL0 299 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 BECN2A8MW95 431 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.67□□□□□ -1.5
CHD3-212ENST00000570758 E7ENQ6 273 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 NEDD8-MDP1E9PL57 170 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 M0QYV0 167 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 SGK1O00141 431 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 DCLK1O15075 740 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 AXIN1O15169 862 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 CACNG3O60359 315 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 ADAM23O75077 832 aa5.67□□□□□ -1.5
CHD3-212ENST00000570758 KLF8O95600 359 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms