RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 COLGALT2Q8IYK4 626 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 SCYL3Q8IZE3 742 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 CCHCR1Q8TD31 782 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 CHURC1Q8WUH1 139 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 RAB24Q969Q5 203 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 MRGPRX1Q96LB2 322 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 ZMYND12Q9H0C1 365 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 MAGEH1Q9H213 219 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 VCPKMTQ9H867 229 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 C6orf50Q9HD87 102 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 RASSF1Q9NS23 344 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 LANCL2Q9NS86 450 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 SACM1LQ9NTJ5 587 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 LRFN1Q9P244 771 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 FBXO10Q9UK96 956 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 CNPY2Q9Y2B0 182 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 PCDHA1Q9Y5I3 950 aa7.8□□□□□ -1.16
CNOT1-222ENST00000570139 RBBP6Q7Z6E9 1792 aaKnown RBP7.79□□□□□ -1.16
CNOT1-222ENST00000570139 RRN3P2A6NIE6 340 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 SYT5O00445 386 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 MSTNO14793 375 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 CYTH3O43739 400 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 PPP6R2O75170 966 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 LETM1O95202 739 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-222ENST00000570139 NDUFB10O96000 172 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 ANXA2P07355 339 aaKnown RBP7.79□□□□□ -1.16
CNOT1-222ENST00000570139 TNFAIP3P21580 790 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 EPHX2P34913 555 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 NAPAP54920 295 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 GUCY1B3Q02153 619 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 PLEKHN1Q494U1 663 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-222ENST00000570139 FLYWCH1Q4VC44 716 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 EMC10Q5UCC4 262 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 ZNF783Q6ZMS7 281 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 Q6ZVL8 140 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 BLIDQ8IZY5 108 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 PQLC1Q8N2U9 271 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 ATG16L2Q8NAA4 619 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 OR7D4Q8NG98 312 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 PDCD2LQ9BRP1 358 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 TRIM54Q9BYV2 358 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 KIAA1683Q9H0B3 1180 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 CNTD2Q9H8S5 307 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 JADE2Q9NQC1 790 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 TM7SF3Q9NS93 570 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 VPS54Q9P1Q0 977 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 COL20A1Q9P218 1284 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 RBPJLQ9UBG7 517 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 GRHPRQ9UBQ7 328 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 DNAI1Q9UI46 699 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 FEM1BQ9UK73 627 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 RCOR1Q9UKL0 485 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 SLC39A10Q9ULF5 831 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 SIK3Q9Y2K2 1263 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 TCHHQ07283 1943 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
CNOT1-222ENST00000570139 OTOFQ9HC10 1997 aa7.79□□□□□ -1.16
CNOT1-222ENST00000570139 PHIPQ8WWQ0 1821 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 BTBD18B2RXH4 712 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 C19orf81C9J6K1 198 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 TIMM44O43615 452 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 GOLGA8HP0CJ92 632 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 VEGFAP15692 232 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-222ENST00000570139 MRPL12P52815 198 aaKnown RBP7.78□□□□□ -1.16
CNOT1-222ENST00000570139 SESN2P58004 480 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-222ENST00000570139 KCTD2Q14681 263 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 STK38Q15208 465 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 ABHD15Q6UXT9 468 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 CD300LDQ6UXZ3 194 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 OTOP2Q7RTS6 562 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 VSIG10LQ86VR7 867 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 SIAH1Q8IUQ4 282 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 ADGRF4Q8IZF3 695 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 GALNT15Q8N3T1 639 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 CUL5Q93034 780 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 C12orf42Q96LP6 360 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 USP28Q96RU2 1077 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 WRNIP1Q96S55 665 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 JMJD4Q9H9V9 463 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 PRDM7Q9NQW5 492 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 TMEM140Q9NV12 185 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 SIDT1Q9NXL6 827 aaKnown RBP7.78□□□□□ -1.16
CNOT1-222ENST00000570139 SSC5DA1L4H1 1573 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 LOC285556D6RIA3 1793 aa7.78□□□□□ -1.16
CNOT1-222ENST00000570139 A0A1W2PRG0 241 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 TRIM43BA6NCK2 446 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 KIF28PB7ZC32 967 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 LAD1O00515 517 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 ACKR2O00590 384 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 ABLIM1O14639 778 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 SPTLC2O15270 562 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 GPR32O75388 356 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 RNASEH2AO75792 299 aaKnown RBP7.77□□□□□ -1.17
CNOT1-222ENST00000570139 PRNPP04156 253 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 PYGLP06737 847 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 DDCP20711 480 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 TRHRP34981 398 aaPredicted RBP7.77□□□□□ -1.17
CNOT1-222ENST00000570139 SREBF1P36956 1147 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 ADCY7P51828 1080 aa7.77□□□□□ -1.17
CNOT1-222ENST00000570139 ARFIP2P53365 341 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms