RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 CXXC1Q9P0U4 656 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 PCSK1NQ9UHG2 260 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 NAALADL1Q9UQQ1 740 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 PIN4Q9Y237 131 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 GINS2Q9Y248 185 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 GIT1Q9Y2X7 761 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 HES2Q9Y543 173 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 IPPQ9Y573 584 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 TRPV2Q9Y5S1 764 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 SQORQ9Y6N5 450 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 A0A087WUV0 522 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 TLDC2A0PJX2 215 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 BCLAF3A2AJT9 711 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CFAP69A5D8W1 941 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 TULP2O00295 520 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 NDUFAB1O14561 156 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PTGESO14684 152 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 XPO1O14980 1071 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 GPR182O15218 404 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SEPT4O43236 478 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CDH16O75309 829 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 FAM155BO75949 473 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CHRNA1P02708 482 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CD48P09326 243 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ZSCAN5DPP0CG00 497 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 RBP3P10745 1247 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CYBAP13498 195 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ETS1P14921 441 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PECAM1P16284 738 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ZFXP17010 805 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 DESP17661 470 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PTPN1P18031 435 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 DRD4P21917 467 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 TGM2P21980 687 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 VAMP1P23763 118 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 LMO2P25791 158 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 MAPK1P28482 360 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SDC4P31431 198 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 L1CAMP32004 1257 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 HPDP32754 393 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 GJC1P36383 396 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 MAP2K2P36507 400 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PSMC4P43686 418 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 LHX1P48742 406 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 VEGFBP49765 207 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CDH6P55285 790 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SEC13P55735 322 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 FCGRTP55899 365 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CORO7P57737 925 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 EIF3EP60228 445 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PLCB3Q01970 1234 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SOX4Q06945 474 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 MGAT3Q09327 533 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 DPYSL3Q14195 570 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 DSC3Q14574 896 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 NOMO1Q15155 1222 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 TAF5Q15542 800 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 DPYSL2Q16555 572 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 NBPF20Q3BBV1 942 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ANKRD20A8PQ5CZ79 823 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 FAM26DQ5JW98 314 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 GNASQ5JWF2 1037 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 UBAP2Q5T6F2 1119 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SH3PXD2AQ5TCZ1 1133 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 TTC19Q6DKK2 380 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CCSAPQ6IQ19 270 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 FAM43BQ6ZT52 329 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PAQR9Q6ZVX9 377 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 MICALCLQ6ZW33 695 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CENPUQ71F23 418 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 STRADAQ7RTN6 431 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 BNIPLQ7Z465 357 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 TADA2BQ86TJ2 420 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SERINC5Q86VE9 423 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 OSTM1Q86WC4 334 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 CCDC25Q86WR0 208 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 RFX6Q8HWS3 928 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 UNC45BQ8IWX7 931 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PPIL6Q8IXY8 311 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 FUKQ8N0W3 1084 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SIX5Q8N196 739 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 TMEM86AQ8N2M4 240 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PQLC3Q8N755 202 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 GLIS1Q8NBF1 620 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ARMC2Q8NEN0 867 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 MYCBPAPQ8TBZ2 947 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 EPS8L3Q8TE67 593 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF473Q8WTR7 871 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ATXN2LQ8WWM7 1075 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 RSAD2Q8WXG1 361 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 THAP11Q96EK4 314 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF317Q96PQ6 595 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SLC9A7Q96T83 725 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ATXN2Q99700 1313 aaKnown RBP5.61□□□□□ -1.51
SF3B3-213ENST00000569687 FAM118BQ9BPY3 351 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF670Q9BS34 389 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 TMEM121Q9BTD3 319 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 ARHGAP39Q9C0H5 1083 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 SPC25Q9HBM1 224 aa5.61□□□□□ -1.51
SF3B3-213ENST00000569687 PCDH18Q9HCL0 1135 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms