RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 TUBGCP4Q9UGJ1 667 aa5.97□□□□□ -1.45
CDH13-213ENST00000569454 GTF2IRD1Q9UHL9 959 aa5.97□□□□□ -1.45
CDH13-213ENST00000569454 STAP1Q9ULZ2 295 aa5.97□□□□□ -1.45
CDH13-213ENST00000569454 FLNBO75369 2602 aaKnown RBP5.96□□□□□ -1.45
CDH13-213ENST00000569454 LAMA3Q16787 3333 aa5.96□□□□□ -1.45
CDH13-213ENST00000569454 EVPLQ92817 2033 aa5.96□□□□□ -1.45
CDH13-213ENST00000569454 SMIM28A0A1B0GU29 152 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 HACD1B0YJ81 288 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 RASA4BC9J798 803 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 H0YHG0 523 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 TNFRSF10AO00220 468 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 TM9SF1O15321 606 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 RASA4O43374 803 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 DUSP11O75319 330 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 CSDE1O75534 798 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 DAB1O75553 588 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 STK10O94804 968 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 SUN1O94901 812 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 ZWINTO95229 277 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 ZBED1O96006 694 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 PFKMP08237 780 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 MYL3P08590 195 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 VIMP08670 466 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 KRT15P19012 456 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 STX2P32856 288 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 RPL22P35268 128 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 GNL1P36915 607 aaPredicted RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 ARL4AP40617 200 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 SLCO1A2P46721 670 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 RAB27AP51159 221 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 BCAR1P56945 870 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 HUNKP57058 714 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 GEMIN4P57678 1058 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 DYNLT1P63172 113 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 NKX3-2P78367 333 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 IFI35P80217 286 aaPredicted RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 SPARCL1Q14515 664 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 LAPTM4AQ15012 233 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 LLGL1Q15334 1064 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 TMED2Q15363 201 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 FSCN1Q16658 493 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 SKIDA1Q1XH10 827 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 SOWAHAQ2M3V2 549 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 LACTB2Q53H82 288 aaPredicted RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 PPP1R26Q5T8A7 1209 aaPredicted RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 TXNRD3NBQ6F5E7 133 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 DARS2Q6PI48 645 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 C17orf99Q6UX52 265 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 RGS9BPQ6ZS82 235 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 PIGWQ7Z7B1 504 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 ACOT1Q86TX2 421 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 TRABD2AQ86V40 505 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 TTC30AQ86WT1 665 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 RASAL3Q86YV0 1011 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 ZBED8Q8IZ13 594 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 ARFGAP1Q8N6T3 406 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 C7orf31Q8N865 590 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 B3GALNT2Q8NCR0 500 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 MCUQ8NE86 351 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 UBA3Q8TBC4 463 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 FAM172AQ8WUF8 416 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 DNAJB3Q8WWF6 145 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 CKAP2Q8WWK9 683 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 KCTD13Q8WZ19 329 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 CPT1BQ92523 772 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 CENPIQ92674 756 aaPredicted RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 ZBTB10Q96DT7 871 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 SEC16BQ96JE7 1060 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 C9orf72Q96LT7 481 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 MAGEB18Q96M61 343 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 ZMAT2Q96NC0 199 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 PPP1R16BQ96T49 567 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 SLC9A7Q96T83 725 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 CYTH2Q99418 400 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 HNRNPABQ99729 332 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 PTPN18Q99952 460 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 MRPL45Q9BRJ2 306 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 MTG1Q9BT17 334 aaPredicted RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 C11orf84Q9BUA3 381 aaPredicted RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 EIF2AQ9BY44 585 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 KDM4CQ9H3R0 1056 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 NXF3Q9H4D5 531 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 ACSS3Q9H6R3 686 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 VPS37BQ9H9H4 285 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 ZFYVE28Q9HCC9 887 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 PCDH18Q9HCL0 1135 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 XAB2Q9HCS7 855 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 PCSK1NQ9UHG2 260 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 DDX20Q9UHI6 824 aaKnown RBP5.96□□□□□ -1.46
CDH13-213ENST00000569454 NAALADL1Q9UQQ1 740 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 GINS2Q9Y248 185 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 HCN4Q9Y3Q4 1203 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 TRPV2Q9Y5S1 764 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 RAD54BQ9Y620 910 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 PTCH2Q9Y6C5 1203 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 IKBKGQ9Y6K9 419 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 EPG5Q9HCE0 2579 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 KAT6AQ92794 2004 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 CHD6Q8TD26 2715 aa5.96□□□□□ -1.46
CDH13-213ENST00000569454 IQANK1A0A1B0GTG1 560 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms