RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 UBXN2BQ14CS0 331 aa13.44□□□□□ -0.26
CDT1-203ENST00000569140 NOP9Q86U38 636 aaKnown RBP13.44□□□□□ -0.26
CDT1-203ENST00000569140 IPO4Q8TEX9 1081 aaKnown RBP13.44□□□□□ -0.26
CDT1-203ENST00000569140 HSFY1Q96LI6 401 aa13.44□□□□□ -0.26
CDT1-203ENST00000569140 CDK5RAP1Q96SZ6 601 aaKnown RBP13.44□□□□□ -0.26
CDT1-203ENST00000569140 LRFN3Q9BTN0 628 aa13.44□□□□□ -0.26
CDT1-203ENST00000569140 CYLDQ9NQC7 956 aa13.44□□□□□ -0.26
CDT1-203ENST00000569140 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDT1-203ENST00000569140 IFNKQ9P0W0 207 aa13.44□□□□□ -0.26
CDT1-203ENST00000569140 DNMT3LQ9UJW3 386 aa13.44□□□□□ -0.26
CDT1-203ENST00000569140 STRIP2Q9ULQ0 834 aa13.44□□□□□ -0.26
CDT1-203ENST00000569140 COL4A3Q01955 1670 aa13.44□□□□□ -0.26
CDT1-203ENST00000569140 SLC12A8A0AV02 714 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 YJEFN3A6XGL0 299 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 E7ENQ6 273 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 TPM3P06753 285 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 MMEP08473 750 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 JAM2P57087 298 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 ZXDBP98169 803 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 PRKCQQ04759 706 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 RUNX3Q13761 415 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 PDGFRLQ15198 375 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 MEA1Q16626 185 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 ITPRIPL2Q3MIP1 535 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 BSPRYQ5W0U4 402 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 PM20D1Q6GTS8 502 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 SCUBE3Q8IX30 993 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 CPA6Q8N4T0 437 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 FBXL6Q8N531 539 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 TMEM35BQ8NCS4 154 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 EPS8L1Q8TE68 723 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 SLC20A1Q8WUM9 679 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 OSCP1Q8WVF1 389 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 ATP2A3Q93084 1043 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 FOXQ1Q9C009 403 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 CLIC5Q9NZA1 410 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 MARCH2Q9P0N8 246 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 CYTH4Q9UIA0 394 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 LSM7Q9UK45 103 aaKnown RBP13.43□□□□□ -0.26
CDT1-203ENST00000569140 NDRG2Q9UN36 371 aaKnown RBP13.43□□□□□ -0.26
CDT1-203ENST00000569140 PCDHGC3Q9UN70 934 aa13.43□□□□□ -0.26
CDT1-203ENST00000569140 CAPN9O14815 690 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 SART1O43290 800 aaKnown RBP13.42□□□□□ -0.26
CDT1-203ENST00000569140 NFATC1O95644 943 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 LTFP02788 710 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 SNX16P57768 344 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 OR6B2Q6IFH4 312 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 ZNF852Q6ZMS4 543 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 MSANTD4Q8NCY6 345 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 IRGQQ8WZA9 623 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 FAM3CQ92520 227 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 CPXM1Q96SM3 734 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 FAM83CQ9BQN1 747 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 LHX5Q9H2C1 402 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 HPS4Q9NQG7 708 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 ABCC13Q9NSE7 274 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 OLA1Q9NTK5 396 aaKnown RBP13.42□□□□□ -0.26
CDT1-203ENST00000569140 TJP2Q9UDY2 1190 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 SFMBT1Q9UHJ3 866 aa13.42□□□□□ -0.26
CDT1-203ENST00000569140 A0A1W2PQC6 194 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 E2F8A0AVK6 867 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 SPECC1L-ADORA2AF8WAN1 911 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 ARNTLO00327 626 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 MAN2B1O00754 1011 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 SLC9A3R1O14745 358 aaPredicted RBP13.41□□□□□ -0.26
CDT1-203ENST00000569140 GABBR2O75899 941 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 CCDC172P0C7W6 258 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 NCAM1P13591 858 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 TCF3P15923 654 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 ZNF445P59923 1031 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 NR1H3Q13133 447 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 NR1I3Q14994 352 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 ASIC2Q16515 512 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 NAA35Q5VZE5 725 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
CDT1-203ENST00000569140 SMYD5Q6GMV2 418 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
CDT1-203ENST00000569140 BHLHA9Q7RTU4 235 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 SCML4Q8N228 414 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 STK32AQ8WU08 396 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 ZFRQ96KR1 1074 aaKnown RBP13.41□□□□□ -0.26
CDT1-203ENST00000569140 KLF16Q9BXK1 252 aaPredicted RBP13.41□□□□□ -0.26
CDT1-203ENST00000569140 SLC4A5Q9BY07 1137 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 LINC00597Q9H2U6 94 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 C8orf33Q9H7E9 229 aaPredicted RBP13.41□□□□□ -0.26
CDT1-203ENST00000569140 ECT2Q9H8V3 914 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 TRPV5Q9NQA5 729 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 TBC1D14Q9P2M4 693 aa13.41□□□□□ -0.26
CDT1-203ENST00000569140 MRPS17Q9Y2R5 130 aaKnown RBP13.41□□□□□ -0.26
CDT1-203ENST00000569140 COL4A2P08572 1712 aa13.4□□□□□ -0.26
CDT1-203ENST00000569140 KANSL1LA0AUZ9 987 aa13.4□□□□□ -0.26
CDT1-203ENST00000569140 LRRC53A6NM62 1247 aa13.4□□□□□ -0.26
CDT1-203ENST00000569140 FAM170BA6NMN3 283 aa13.4□□□□□ -0.26
CDT1-203ENST00000569140 PAPSS1O43252 624 aaPredicted RBP13.4□□□□□ -0.26
CDT1-203ENST00000569140 MSI1O43347 362 aaKnown RBP13.4□□□□□ -0.26
CDT1-203ENST00000569140 CBFA2T2O43439 604 aa13.4□□□□□ -0.26
CDT1-203ENST00000569140 GRAP2O75791 330 aa13.4□□□□□ -0.26
CDT1-203ENST00000569140 ERBB2P04626 1255 aa13.4□□□□□ -0.26
CDT1-203ENST00000569140 DCNP07585 359 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms