RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TLR8Q9NR97 1041 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 KLK13Q9UKR3 277 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 NFE2L3Q9Y4A8 694 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 CACNA1GO43497 2377 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 TLR5O60602 858 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 PPP6R2O75170 966 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 COL9A2Q14055 689 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 ACAP1Q15027 740 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 E2F5Q15329 346 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 ZNF699Q32M78 642 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 WDR45BQ5MNZ6 344 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 FAM173BQ6P4H8 233 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 PAQR9Q6ZVX9 377 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 RAB44Q7Z6P3 723 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 GOLGA5Q8TBA6 731 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 IPO4Q8TEX9 1081 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 HPS3Q969F9 1004 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 ZNF419Q96HQ0 510 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 C7orf25Q9BPX7 421 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 CSNK1G1Q9HCP0 422 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 DNAJC17Q9NVM6 304 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 GMIPQ9P107 970 aa16.66■□□□□ 0.26
HERPUD1-215ENST00000568676 SPEGQ15772 3267 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 PCNX2A6NKB5 2137 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 NPC1O15118 1278 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 CLIC2O15247 247 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 NDUFS2O75306 463 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 AP1G2O75843 785 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 CD59P13987 128 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 NDUFV2P19404 249 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 ATP5C1P36542 298 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 PI4KAP42356 2102 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 CLDN10P78369 228 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 BIRC3Q13489 604 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 STK38Q15208 465 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 BMT2Q1RMZ1 405 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 KLHDC10Q6PID8 442 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 UNC13DQ70J99 1090 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 METTL3Q86U44 580 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 ZNF516Q92618 1163 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 INTS4Q96HW7 963 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 HSPA12BQ96MM6 686 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 BBS2Q9BXC9 721 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 CD248Q9HCU0 757 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 KRT82Q9NSB4 513 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 LHX6Q9UPM6 363 aa16.65■□□□□ 0.26
HERPUD1-215ENST00000568676 ATRXP46100 2492 aa16.64■□□□□ 0.26
HERPUD1-215ENST00000568676 PCDH15Q96QU1 1955 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 ZZEF1O43149 2961 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 NEDD8-MDP1E9PL57 170 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 EXOC3O60645 756 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 TYRP14679 529 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 RING1Q06587 406 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 EHHADHQ08426 723 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 EGFLAMQ63HQ2 1017 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 UNC93AQ86WB7 457 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 PROSER1Q86XN7 944 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 MIB1Q86YT6 1006 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 SLC41A1Q8IVJ1 513 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 RGL4Q8IZJ4 473 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 FUKQ8N0W3 1084 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 CRYBG2Q8N1P7 616 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 LINC00301Q8NCQ3 95 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 TMEM174Q8WUU8 243 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 TAF4BQ92750 862 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 KLF16Q9BXK1 252 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 SMYD3Q9H7B4 428 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 PNPLA8Q9NP80 782 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 TFIP11Q9UBB9 837 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 HCN2Q9UL51 889 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 CYP8B1Q9UNU6 501 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 PCDHB9Q9Y5E1 797 aa16.64■□□□□ 0.25
HERPUD1-215ENST00000568676 PVALEFA0A1B0GWK0 134 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 SPTLC2O15270 562 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 GREM1O60565 184 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 GJB3O75712 270 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 CLSTN1O94985 981 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 RPN1P04843 607 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 IRF1P10914 325 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 DGKGP49619 791 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 CDH8P55286 799 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 NCOA4Q13772 614 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 TRIP6Q15654 476 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 KNOP1Q1ED39 458 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 SGSM1Q2NKQ1 1148 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 PLEKHG6Q3KR16 790 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 TADA2BQ86TJ2 420 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 NELFCDQ8IXH7 590 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 PARD3BQ8TEW8 1205 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 ADAMTS14Q8WXS8 1223 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 DHX58Q96C10 678 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 MRGPRX1Q96LB2 322 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 SCML2Q9UQR0 700 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 ZNF510Q9Y2H8 683 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 MYOFQ9NZM1 2061 aa16.63■□□□□ 0.25
HERPUD1-215ENST00000568676 WDFY3Q8IZQ1 3526 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 CD6P30203 668 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms