RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CHKAP35790 457 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 EFHC1Q5JVL4 640 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 LHX8Q68G74 356 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 TLCD1Q96CP7 247 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 HAUS1Q96CS2 278 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 ANKRD27Q96NW4 1050 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 CALN1Q9BXU9 219 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 ADAM7Q9H2U9 754 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 NGRNQ9NPE2 291 aaKnown RBP24.25■■□□□ 1.47
LINC00543-201ENST00000567234 TTC4O95801 387 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 SKIP12755 728 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 DYNLT1P63172 113 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 ATP11AP98196 1134 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 ITGA7Q13683 1181 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 DPYSL3Q14195 570 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 MORF4L2Q15014 288 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 CDO1Q16878 200 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 SPATA18Q8TC71 538 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 KCTD13Q8WZ19 329 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 EBF2Q9HAK2 575 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 TDRD15B5MCY1 1934 aaKnown RBP24.24■■□□□ 1.47
LINC00543-201ENST00000567234 A0A0U1RQF3 1178 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 SGK1O00141 431 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 TKTP29401 623 aaKnown RBP24.24■■□□□ 1.47
LINC00543-201ENST00000567234 CD52P31358 61 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 TRIM71Q2Q1W2 868 aaKnown RBP24.24■■□□□ 1.47
LINC00543-201ENST00000567234 C11orf91Q3C1V1 193 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 PCGF5Q86SE9 256 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 ANKS4BQ8N8V4 417 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 RNF157Q96PX1 679 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 TMEM121Q9BTD3 319 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 DDX23Q9BUQ8 820 aaKnown RBP24.24■■□□□ 1.47
LINC00543-201ENST00000567234 UBN1Q9NPG3 1134 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 MIOSQ9NXC5 875 aa24.24■■□□□ 1.47
LINC00543-201ENST00000567234 NPR3P17342 541 aa24.23■■□□□ 1.47
LINC00543-201ENST00000567234 CLNS1AP54105 237 aaKnown RBP24.23■■□□□ 1.47
LINC00543-201ENST00000567234 GPS1Q13098 491 aa24.23■■□□□ 1.47
LINC00543-201ENST00000567234 LPIN1Q14693 890 aa24.23■■□□□ 1.47
LINC00543-201ENST00000567234 GLIS1Q8NBF1 620 aa24.23■■□□□ 1.47
LINC00543-201ENST00000567234 LPPQ93052 612 aa24.23■■□□□ 1.47
LINC00543-201ENST00000567234 PGBD4Q96DM1 585 aa24.23■■□□□ 1.47
LINC00543-201ENST00000567234 UNC93B1Q9H1C4 597 aa24.23■■□□□ 1.47
LINC00543-201ENST00000567234 BCCIPQ9P287 314 aaKnown RBP eCLIP24.23■■□□□ 1.47
LINC00543-201ENST00000567234 NOVA2Q9UNW9 492 aaKnown RBP24.23■■□□□ 1.47
LINC00543-201ENST00000567234 DNM1LO00429 736 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 LIN7AO14910 233 aaPredicted RBP24.22■■□□□ 1.47
LINC00543-201ENST00000567234 MCF2LO15068 1137 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 LCP1P13796 627 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 CLCNKBP51801 687 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 HDAC4P56524 1084 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 KRT81Q14533 505 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 MTFR1Q15390 333 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 PIGZQ86VD9 579 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 STMN4Q9H169 189 aaPredicted RBP24.22■■□□□ 1.47
LINC00543-201ENST00000567234 PPANQ9NQ55 473 aaKnown RBP24.22■■□□□ 1.47
LINC00543-201ENST00000567234 SHOC2Q9UQ13 582 aa24.22■■□□□ 1.47
LINC00543-201ENST00000567234 SCNN1GP51170 649 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 ACLYP53396 1101 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 UPP1Q16831 310 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 RAB6CQ53S08 254 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 SCYL2Q6P3W7 929 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 STRADAQ7RTN6 431 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 CEP57Q86XR8 500 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 ZNF670Q9BS34 389 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.21■■□□□ 1.47
LINC00543-201ENST00000567234 RAB6CQ9H0N0 254 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 DDX43Q9NXZ2 648 aaKnown RBP24.21■■□□□ 1.47
LINC00543-201ENST00000567234 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.21■■□□□ 1.47
LINC00543-201ENST00000567234 NOD1Q9Y239 953 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 SMAPO00193 183 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 MGEA5O60502 916 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 ATP2C2O75185 946 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 ZSCAN5DPP0CG00 497 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 STIP1P31948 543 aaKnown RBP24.21■■□□□ 1.47
LINC00543-201ENST00000567234 EIF3EP60228 445 aaKnown RBP24.21■■□□□ 1.47
LINC00543-201ENST00000567234 NOMO1Q15155 1222 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 MFSD5Q6N075 450 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 PAQR9Q6ZVX9 377 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 PRUNE1Q86TP1 453 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 CLEC4CQ8WTT0 213 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 RSAD2Q8WXG1 361 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 SNRNP25Q9BV90 132 aaKnown RBP24.21■■□□□ 1.47
LINC00543-201ENST00000567234 PHACTR1Q9C0D0 580 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 PCDH18Q9HCL0 1135 aa24.21■■□□□ 1.47
LINC00543-201ENST00000567234 SAE1Q9UBE0 346 aaPredicted RBP24.21■■□□□ 1.47
LINC00543-201ENST00000567234 MOXD2PA6NHM9 499 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 RASGRF2O14827 1237 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 TCEA3O75764 348 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 AGTP01019 485 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 TGM2P21980 687 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 MATKP42679 507 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 AFF1P51825 1210 aaKnown RBP24.2■■□□□ 1.46
LINC00543-201ENST00000567234 MMRN1Q13201 1228 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 ERMARDQ5T6L9 678 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 RNASEH2BQ5TBB1 312 aaKnown RBP24.2■■□□□ 1.46
LINC00543-201ENST00000567234 DSTYKQ6XUX3 929 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 CCDC197Q8NCU1 140 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.2■■□□□ 1.46
LINC00543-201ENST00000567234 FAF2Q96CS3 445 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 TSEN34Q9BSV6 310 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms