RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 HS2ST1Q7LGA3 356 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 LIMS2Q7Z4I7 341 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 RABEPKQ7Z6M1 372 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 DDX42Q86XP3 938 aaKnown RBP eCLIP11.96□□□□□ -0.49
SPG7-216ENST00000567138 MIB1Q86YT6 1006 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 ETFBKMTQ8IXQ9 262 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 CEP57L1Q8IYX8 460 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 SYCP3Q8IZU3 236 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 FMR1NBQ8N0W7 255 aaPredicted RBP11.96□□□□□ -0.49
SPG7-216ENST00000567138 KIAA1958Q8N8K9 716 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 PNPLA1Q8N8W4 532 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 TRIML1Q8N9V2 468 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 DNAJC19Q96DA6 116 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 HPDLQ96IR7 371 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 DNAAF2Q9NVR5 837 aaKnown RBP11.96□□□□□ -0.49
SPG7-216ENST00000567138 KBTBD4Q9NVX7 518 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 USP25Q9UHP3 1055 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 HCN2Q9UL51 889 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 R3HCC1Q9Y3T6 440 aaKnown RBP11.96□□□□□ -0.49
SPG7-216ENST00000567138 NME7Q9Y5B8 376 aa11.96□□□□□ -0.49
SPG7-216ENST00000567138 SETXQ7Z333 2677 aaKnown RBP11.96□□□□□ -0.5
SPG7-216ENST00000567138 TULP3O75386 442 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 SYPP08247 313 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 IRF1P10914 325 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 NDUFV2P19404 249 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 PPP3CCP48454 512 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 HNRNPDQ14103 355 aaKnown RBP11.95□□□□□ -0.5
SPG7-216ENST00000567138 PLEKHG6Q3KR16 790 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 TDRD10Q5VZ19 366 aaKnown RBP11.95□□□□□ -0.5
SPG7-216ENST00000567138 BTBD8Q5XKL5 378 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 EGFLAMQ63HQ2 1017 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 KRBA2Q6ZNG9 492 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 DPH6Q7L8W6 267 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 TRMT11Q7Z4G4 463 aaKnown RBP11.95□□□□□ -0.5
SPG7-216ENST00000567138 NAXDQ8IW45 347 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 BBS7Q8IWZ6 715 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 RGL4Q8IZJ4 473 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 TERB1Q8NA31 727 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 MYCBPAPQ8TBZ2 947 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 MDM1Q8TC05 714 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 ADAMTS14Q8WXS8 1223 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 FBXO32Q969P5 355 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 WBP2Q969T9 261 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 PAGE5Q96GU1 130 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 ZFRQ96KR1 1074 aaKnown RBP11.95□□□□□ -0.5
SPG7-216ENST00000567138 C8orf48Q96LL4 319 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 CEP295NLQ96MC4 621 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 SLITRK1Q96PX8 696 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 MMS19Q96T76 1030 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 ACOX2Q99424 681 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 MRPL45Q9BRJ2 306 aaKnown RBP11.95□□□□□ -0.5
SPG7-216ENST00000567138 ZNF518BQ9C0D4 1074 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 SLC6A17Q9H1V8 727 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 TNMDQ9H2S6 317 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 DPEP3Q9H4B8 488 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 MAGEF1Q9HAY2 307 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 EHD2Q9NZN4 543 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 TBC1D14Q9P2M4 693 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 PCDHB9Q9Y5E1 797 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 CKAP5Q14008 2032 aa11.95□□□□□ -0.5
SPG7-216ENST00000567138 A0A1W2PQF6 199 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 E2F8A0AVK6 867 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 CLDN5O00501 218 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 HOXC11O43248 304 aaPredicted RBP11.94□□□□□ -0.5
SPG7-216ENST00000567138 COCHO43405 550 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 GJB3O75712 270 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 TNNC2P02585 160 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 IDEP14735 1019 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 NTSR1P30989 418 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 AFMP43652 599 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 AMPD3Q01432 767 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 ANO4Q32M45 955 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 GRAMD1CQ8IYS0 662 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 GPD1LQ8N335 351 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 IPO4Q8TEX9 1081 aaKnown RBP11.94□□□□□ -0.5
SPG7-216ENST00000567138 LRRC27Q9C0I9 530 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 SNX25Q9H3E2 840 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 CCDC86Q9H6F5 360 aaKnown RBP11.94□□□□□ -0.5
SPG7-216ENST00000567138 OLFML3Q9NRN5 406 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 DEC1Q9P2X7 70 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 SH3BP1Q9Y3L3 701 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 RAD54BQ9Y620 910 aa11.94□□□□□ -0.5
SPG7-216ENST00000567138 URB1O60287 2271 aaKnown RBP11.94□□□□□ -0.5
SPG7-216ENST00000567138 FRMD3A2A2Y4 597 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 PRPF6O94906 941 aaKnown RBP11.93□□□□□ -0.5
SPG7-216ENST00000567138 ZIC2O95409 532 aaPredicted RBP11.93□□□□□ -0.5
SPG7-216ENST00000567138 MAOBP27338 520 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 YWHAQP27348 245 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 CASP1P29466 404 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 GRIK2Q13002 908 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 ALCAMQ13740 583 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 NUMA1Q14980 2115 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 KIAA1324Q6UXG2 1013 aaKnown RBP11.93□□□□□ -0.5
SPG7-216ENST00000567138 CCNI2Q6ZMN8 369 aaPredicted RBP11.93□□□□□ -0.5
SPG7-216ENST00000567138 TMEM25Q86YD3 366 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 CBWD2Q8IUF1 395 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 OR6B3Q8NGW1 331 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 HNRNPLLQ8WVV9 542 aaKnown RBP11.93□□□□□ -0.5
SPG7-216ENST00000567138 OTUB2Q96DC9 234 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms