RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ITGA11Q9UKX5 1188 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 CCDC195A0A1B0GUA6 201 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 MEI4A8MW99 385 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 DKC1O60832 514 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-215ENST00000566843 KLHL2O95198 593 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 ATG7O95352 703 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 SPATA31D3P0C874 917 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 KITP10721 976 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 ETS2P15036 469 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 SLC25A3Q00325 362 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 ROR1Q01973 937 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 STX3Q13277 289 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 ZBTB41Q5SVQ8 909 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 LPCAT4Q643R3 524 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 SCARA3Q6AZY7 606 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 UGT2A3Q6UWM9 527 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 SPATA31D4Q6ZUB0 917 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 SPATA24Q86W54 205 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 JOSD2Q8TAC2 188 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 GDPD5Q8WTR4 605 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 SPON1Q9HCB6 807 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 SMYD2Q9NRG4 433 aa16.27■□□□□ 0.2
COMMD4-215ENST00000566843 MARCOQ9UEW3 520 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-215ENST00000566843 YDJCA8MPS7 323 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-215ENST00000566843 NRLP54845 237 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 AQP4P55087 323 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 NOMO1Q15155 1222 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 ANKRD20A4Q4UJ75 823 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 CTAGE3PQ8IX95 158 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 ACTRT2Q8TDY3 377 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 ATP6V0A1Q93050 837 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 ZBTB45Q96K62 511 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-215ENST00000566843 PDCD2LQ9BRP1 358 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 A6NJR5 290 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 AVILO75366 819 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 ASLP04424 464 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 KRT3P12035 628 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 CHN2P52757 468 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 DLG1Q12959 904 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 MAP7Q14244 749 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 PDK3Q15120 406 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 SPATA18Q8TC71 538 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 TFAP2BQ92481 460 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 NLRP4Q96MN2 994 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 SLC13A1Q9BZW2 595 aa16.26■□□□□ 0.19
COMMD4-215ENST00000566843 DHX33Q9H6R0 707 aaKnown RBP16.26■□□□□ 0.19
COMMD4-215ENST00000566843 XAB2Q9HCS7 855 aaKnown RBP16.26■□□□□ 0.19
COMMD4-215ENST00000566843 ADGRA2Q96PE1 1338 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 ARHGAP42A6NI28 874 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 TTLL13PA6NNM8 815 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 KRT38O76015 456 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 SMIM18P0DKX4 95 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 MAGEA6P43360 314 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 IRX4P78413 519 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 CNTN2Q02246 1040 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 PTPN20Q4JDL3 420 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 STXBP5Q5T5C0 1151 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 ARMC3Q5W041 872 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 TIFABQ6ZNK6 161 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 KCTD6Q8NC69 237 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 FAF2Q96CS3 445 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 DGCR14Q96DF8 476 aaKnown RBP16.25■□□□□ 0.19
COMMD4-215ENST00000566843 HIC2Q96JB3 615 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 ZNF778Q96MU6 729 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 IMPG2Q9BZV3 1241 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 RSAD1Q9HA92 442 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 CYP26B1Q9NR63 512 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 PXMP2Q9NR77 195 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 LMCD1Q9NZU5 365 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 ENDOD1O94919 500 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 ITGBL1O95965 494 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-215ENST00000566843 PEX2P28328 305 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 POLR2BP30876 1174 aaKnown RBP16.25■□□□□ 0.19
COMMD4-215ENST00000566843 CLCN2P51788 898 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 AP3M2P53677 418 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 DARS2Q6PI48 645 aaKnown RBP16.25■□□□□ 0.19
COMMD4-215ENST00000566843 SATL1Q86VE3 508 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 SLC26A7Q8TE54 656 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 RTP4Q96DX8 246 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 GLIS2Q9BZE0 524 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-215ENST00000566843 CISHQ9NSE2 258 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 PTTG2Q9NZH5 202 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 PAK5Q9P286 719 aa16.25■□□□□ 0.19
COMMD4-215ENST00000566843 ZC3H7BQ9UGR2 993 aaKnown RBP16.25■□□□□ 0.19
COMMD4-215ENST00000566843 SF3B1O75533 1304 aaKnown RBP eCLIP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 HMX2A2RU54 273 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 TTC36A6NLP5 189 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 TRUB2O95900 331 aaKnown RBP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 GSRP00390 522 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 CST3P01034 146 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 APOEP02649 317 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 RGS2P41220 211 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 COPAP53621 1224 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 BMPR2Q13873 1038 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 MMEL1Q495T6 779 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 RALGPS1Q5JS13 557 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 DENND1BQ6P3S1 775 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 CAND1Q86VP6 1230 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms