RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 GPR179Q6PRD1 2367 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 A0A1W2PQH9 124 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 SLC9A3R1O14745 358 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 TNFRSF10BO14763 440 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 TBX18O95935 607 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 ADH1CP00326 375 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 HMBSP08397 361 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 ADH5P11766 374 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 PPP1R2P41236 205 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 FMO5P49326 533 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 PGFP49763 221 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 RAD23BP54727 409 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 NRLP54845 237 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 MLLT6P55198 1093 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 UBE2HP62256 183 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 YWHAEP62258 255 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 CUL2Q13617 745 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 MORC3Q14149 939 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 ANO4Q32M45 955 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 COBLL1Q53SF7 1204 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 C2orf27AQ580R0 203 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 TMEM196Q5HYL7 178 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 MIB1Q86YT6 1006 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 PPM1KQ8N3J5 372 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 NAT16Q8N8M0 369 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 SPATA20Q8TB22 786 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 OVCA2Q8WZ82 227 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 BHMTQ93088 406 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 ERLEC1Q96DZ1 483 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 TMEM176AQ96HP8 235 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 CEP63Q96MT8 703 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 NT5C1BQ96P26 610 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 SEMA4AQ9H3S1 761 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 METTL14Q9HCE5 456 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 ZDHHC4Q9NPG8 344 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 GMEB2Q9UKD1 530 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 USP18Q9UMW8 372 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 PCDHB4Q9Y5E5 795 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 NUP205Q92621 2012 aa10.66□□□□□ -0.7
GTF3C1-206ENST00000566779 PIK3R2O00459 728 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 TRDMT1O14717 391 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 OLFM2O95897 454 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 CALCAP01258 141 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 CCDC192P0DO97 292 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 RARGP13631 454 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 PFKLP17858 780 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 DRD1P21728 446 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 BMP6P22004 513 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 SLC6A11P48066 632 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 SLC8A3P57103 927 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 ENPEPQ07075 957 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 GOLGA8FQ08AF8 430 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 GOLGA8DPQ0D2H9 430 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 CETN1Q12798 172 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 SIM2Q14190 667 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 DHCR24Q15392 516 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 TPD52L1Q16890 204 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 LY6G5CQ5SRR4 150 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 BTBD8Q5XKL5 378 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 TTI2Q6NXR4 508 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 TMEM270Q6UE05 265 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 C12orf40Q86WS4 652 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 BBS7Q8IWZ6 715 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 ZC3H3Q8IXZ2 948 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 CCDC33Q8N5R6 958 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 SLC4A11Q8NBS3 891 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 RUBCNQ92622 972 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 SECISBP2LQ93073 1101 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 WBP2Q969T9 261 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 ZFRQ96KR1 1074 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 DUSP9Q99956 384 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 SRRTQ9BXP5 876 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 DUSP16Q9BY84 665 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 NMUR1Q9HB89 426 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 HESX1Q9UBX0 185 aa10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 LSM7Q9UK45 103 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-206ENST00000566779 ANTXRLA6NF34 631 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 HHLA1C9JL84 531 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 NEDD8-MDP1E9PL57 170 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 ATG13O75143 517 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 TDGF1P13385 188 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 KRT5P13647 590 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 TBXAS1P24557 533 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 ATP5C1P36542 298 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 OPRD1P41143 372 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 RGS7P49802 495 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 EFEMP1Q12805 493 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 SGO2Q562F6 1265 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 TPGS1Q6ZTW0 290 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 RRAGAQ7L523 313 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 SFTPA1Q8IWL2 248 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 SIX6OS1Q8N1H7 587 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 SYNPOQ8N3V7 929 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 TTC39CQ8N584 583 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 SUMF1Q8NBK3 374 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 ZBTB44Q8NCP5 570 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 UBA3Q8TBC4 463 aa10.64□□□□□ -0.71
GTF3C1-206ENST00000566779 NDRG1Q92597 394 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms