RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 FBXO32Q969P5 355 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 TBCBQ99426 244 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 RRN3Q9NYV6 651 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 RNF14Q9UBS8 474 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 COL4A4P53420 1690 aaPredicted RBP19.58■□□□□ 0.73
COMMD4-213ENST00000565834 FAM92AA1XBS5 289 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 C2orf71A6NGG8 1288 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 KRT7P08729 469 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 PAFAH1B1P43034 410 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 ZNF211Q13398 564 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-213ENST00000565834 MTMR3Q13615 1198 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 ZFYVE27Q5T4F4 411 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 SEL1L2Q5TEA6 688 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 SYPL2Q5VXT5 272 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 BTBD8Q5XKL5 378 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 BEND5Q7L4P6 421 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 STRADAQ7RTN6 431 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 ARHGAP18Q8N392 663 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 EDEM1Q92611 657 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 NT5C3BQ969T7 300 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 MS4A14Q96JA4 679 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 NPY6RQ99463 290 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 CARD6Q9BX69 1037 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 ZWILCHQ9H900 591 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 ABCC13Q9NSE7 274 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 PCSK1NQ9UHG2 260 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 USP18Q9UMW8 372 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 CHD9Q3L8U1 2897 aa19.58■□□□□ 0.72
COMMD4-213ENST00000565834 MTCL1Q9Y4B5 1905 aaKnown RBP19.57■□□□□ 0.72
COMMD4-213ENST00000565834 HIDE1A8MVS5 230 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 FSCN2O14926 492 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 TGM5O43548 720 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 PRPSAP2O60256 369 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 TRUB2O95900 331 aaKnown RBP19.57■□□□□ 0.72
COMMD4-213ENST00000565834 KLRC2P26717 231 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 HDAC4P56524 1084 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 GPM6BQ13491 265 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 VEPH1Q14D04 833 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 RAB6CQ53S08 254 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 SCD5Q86SK9 330 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 CEP112Q8N8E3 955 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 MNS1Q8NEH6 495 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 TTLL2Q9BWV7 592 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 ADAM33Q9BZ11 813 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 RAB6CQ9H0N0 254 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 NKX2-4Q9H2Z4 354 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 DDX56Q9NY93 547 aaKnown RBP19.57■□□□□ 0.72
COMMD4-213ENST00000565834 EHD2Q9NZN4 543 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 GMIPQ9P107 970 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 INSL5Q9Y5Q6 135 aa19.57■□□□□ 0.72
COMMD4-213ENST00000565834 RANBP2P49792 3224 aaKnown RBP19.57■□□□□ 0.72
COMMD4-213ENST00000565834 MYO7AQ13402 2215 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 A0A1W2PQH9 124 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 H3BNC9 293 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 M0QYT0 321 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 SLU7O95391 586 aaKnown RBP19.56■□□□□ 0.72
COMMD4-213ENST00000565834 PYGMP11217 842 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 IL1R2P27930 398 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 BMP8BP34820 402 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 TXNRD3NBQ6F5E7 133 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 SCYL2Q6P3W7 929 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 RASGEF1CQ8N431 466 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 SLC7A14Q8TBB6 771 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 ACTRT1Q8TDG2 376 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 MAGED2Q9UNF1 606 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-213ENST00000565834 CHD7Q9P2D1 2997 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 PDE4DIPQ5VU43 2346 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 PGRMC1O00264 195 aaKnown RBP19.56■□□□□ 0.72
COMMD4-213ENST00000565834 PDE2AO00408 941 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-213ENST00000565834 ZRANB2O95218 330 aaKnown RBP eCLIP19.56■□□□□ 0.72
COMMD4-213ENST00000565834 KRT1P04264 644 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 SPATA31D3P0C874 917 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 CSH1P0DML2 217 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 CSH2P0DML3 217 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 PITX1P78337 314 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-213ENST00000565834 TWF1Q12792 350 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 TAF10Q12962 218 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 CAMK1Q14012 370 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 SMTNL2Q2TAL5 461 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 ATP13A4Q4VNC1 1196 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 ODF2Q5BJF6 829 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 OTUD1Q5VV17 481 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-213ENST00000565834 PPP2R2DQ66LE6 453 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 SPATA31D4Q6ZUB0 917 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 EXD1Q8NHP7 514 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 SLITRK1Q96PX8 696 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 PEBP4Q96S96 227 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 FAM204AQ9H8W3 233 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 NMUR1Q9HB89 426 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 TLR8Q9NR97 1041 aaKnown RBP19.56■□□□□ 0.72
COMMD4-213ENST00000565834 KLHL11Q9NVR0 708 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 SMARCAL1Q9NZC9 954 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 FBXW11Q9UKB1 542 aa19.56■□□□□ 0.72
COMMD4-213ENST00000565834 ENDOD1O94919 500 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 GLUD1P00367 558 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 RDXP35241 583 aaKnown RBP19.55■□□□□ 0.72
COMMD4-213ENST00000565834 IRS1P35568 1242 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 PGFP49763 221 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 PSEN1P49768 467 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 EPHB3P54753 998 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms