RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 ODF2Q5BJF6 829 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 STRADAQ7RTN6 431 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 KLHL7Q8IXQ5 586 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 NUP93Q8N1F7 819 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 EDEM1Q92611 657 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 NT5C3BQ969T7 300 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 KRT12Q99456 494 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 NCAPGQ9BPX3 1015 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 HEMGNQ9BXL5 484 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 OSBPL8Q9BZF1 889 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 ANKZF1Q9H8Y5 726 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 GPATCH2LQ9NWQ4 482 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 AFF4Q9UHB7 1163 aaKnown RBP11.75□□□□□ -0.53
SNX29-204ENST00000564791 STAP1Q9ULZ2 295 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 SYNJ2BP-COX16A0A087WUM0 186 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 CCDC188H7C350 402 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 DYNC1I1O14576 645 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 NCAM1P13591 858 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 KDELR1P24390 212 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 PGFP49763 221 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 YWHAGP61981 247 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNX29-204ENST00000564791 USP46P62068 366 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 MRPS25P82663 173 aaKnown RBP11.74□□□□□ -0.53
SNX29-204ENST00000564791 KRT17Q04695 432 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 SIX1Q15475 284 aaPredicted RBP11.74□□□□□ -0.53
SNX29-204ENST00000564791 BSPRYQ5W0U4 402 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 BNIPLQ7Z465 357 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 SCD5Q86SK9 330 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 GPR161Q8N6U8 529 aaKnown RBP11.74□□□□□ -0.53
SNX29-204ENST00000564791 PRELID2Q8N945 189 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 KLHL23Q8NBE8 558 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 SLC7A14Q8TBB6 771 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 TEKT4Q8WW24 435 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 SNRNP25Q9BV90 132 aaKnown RBP11.74□□□□□ -0.53
SNX29-204ENST00000564791 DDX47Q9H0S4 455 aaKnown RBP11.74□□□□□ -0.53
SNX29-204ENST00000564791 ZBP1Q9H171 429 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNX29-204ENST00000564791 COX16Q9P0S2 106 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 SCML2Q9UQR0 700 aa11.74□□□□□ -0.53
SNX29-204ENST00000564791 CEP290O15078 2479 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 hCG_1818297A0A087WSY0 165 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 M0QYT0 321 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 ENDOD1O94919 500 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 ABLIM3O94929 683 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 SEC24AO95486 1093 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 CD48P09326 243 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 KRT10P13645 584 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 ATF6P18850 670 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 CTNNB1P35222 781 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 PTPN7P35236 360 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 RDXP35241 583 aaKnown RBP11.73□□□□□ -0.53
SNX29-204ENST00000564791 CETN2P41208 172 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 CDKN2BP42772 138 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 COPS2P61201 443 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 RPL10AP62906 217 aaKnown RBP11.73□□□□□ -0.53
SNX29-204ENST00000564791 KLF1Q13351 362 aaPredicted RBP11.73□□□□□ -0.53
SNX29-204ENST00000564791 MTMR3Q13615 1198 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 PPP2R5EQ16537 467 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 C9orf50Q5SZB4 431 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 COL13A1Q5TAT6 717 aaPredicted RBP11.73□□□□□ -0.53
SNX29-204ENST00000564791 KAZNQ674X7 775 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 C8orf74Q6P047 294 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 FAM131BQ86XD5 332 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 CCDC185Q8N715 623 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 KCTD6Q8NC69 237 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 CMASQ8NFW8 434 aaPredicted RBP11.73□□□□□ -0.53
SNX29-204ENST00000564791 ADAM32Q8TC27 787 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 SPATA17Q96L03 361 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 PNKPQ96T60 521 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 LRRC1Q9BTT6 524 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 FBXO44Q9H4M3 255 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 NMUR1Q9HB89 426 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 MRPL17Q9NRX2 175 aaKnown RBP11.73□□□□□ -0.53
SNX29-204ENST00000564791 PIGVQ9NUD9 493 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 IL37Q9NZH6 218 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 GMIPQ9P107 970 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 MTUS1Q9ULD2 1270 aa11.73□□□□□ -0.53
SNX29-204ENST00000564791 A0A1W2PQH9 124 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 CCDC85CA6NKD9 419 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 MDM4O15151 490 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 LILRB3O75022 631 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 PHF2O75151 1096 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 RTN3O95197 1032 aaPredicted RBP11.72□□□□□ -0.53
SNX29-204ENST00000564791 CTSAP10619 480 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 YWHAQP27348 245 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 MAGEA10P43363 369 aaPredicted RBP11.72□□□□□ -0.53
SNX29-204ENST00000564791 ARSEP51690 589 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 CDH6P55285 790 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 DEUP1Q05D60 604 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 ADCY2Q08462 1091 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 NME3Q13232 169 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 RAB33AQ14088 237 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 TAZQ16635 292 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 CA9Q16790 459 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 BOLA3Q53S33 107 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 ZC3H12AQ5D1E8 599 aaKnown RBP11.72□□□□□ -0.53
SNX29-204ENST00000564791 TFDP3Q5H9I0 405 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 BTBD8Q5XKL5 378 aa11.72□□□□□ -0.53
SNX29-204ENST00000564791 TPGS2Q68CL5 300 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms