RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-213	ENST00000564757	RAB11FIP2	Q7L804	512 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	ADGRG5	Q8IZF4	528 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	TMEM132C	Q8N3T6	1108 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	B3GALNT2	Q8NCR0	500 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	NAXE	Q8NCW5	288 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	STT3B	Q8TCJ2	826 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	OSCP1	Q8WVF1	389 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	FAM136A	Q96C01	138 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	TEX101	Q9BY14	249 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	ACTRT3	Q9BYD9	372 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	RIC8A	Q9NPQ8	531 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	SRP68	Q9UHB9	627 aa	Known RBP	4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	CCNL1	Q9UK58	526 aa	Predicted RBP	4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	CRYL1	Q9Y2S2	319 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	MAP3K2	Q9Y2U5	619 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	DTNA	Q9Y4J8	743 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	SPATA31A3	Q5VYP0	1347 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757		A0A1W2PS29	197 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	PSMD9	O00233	223 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	RNASET2	O00584	256 aa	Known RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	PCDH17	O14917	1159 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	PPP6R2	O75170	966 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	NCR1	O76036	304 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	NTSR2	O95665	410 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	ITGB6	P18564	788 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	RBL1	P28749	1068 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	SLC5A2	P31639	672 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	UQCRC1	P31930	480 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	ADD2	P35612	726 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	CLK3	P49761	638 aa	Known RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	PRKAA2	P54646	552 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	REST	Q13127	1097 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	EIF2B5	Q13144	721 aa	Known RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	CUL4B	Q13620	913 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	SLC12A1	Q13621	1099 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	MAPRE1	Q15691	268 aa	Known RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	TRIM71	Q2Q1W2	868 aa	Known RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	BTBD16	Q32M84	506 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	VPS53	Q5VIR6	699 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	METRNL	Q641Q3	311 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	ABLIM2	Q6H8Q1	611 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	TANGO2	Q6ICL3	276 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	RD3	Q7Z3Z2	195 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	C11orf44	Q8N8P7	122 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	PPHLN1	Q8NEY8	458 aa	Known RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	OR6Y1	Q8NGX8	325 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	CSGALNACT1	Q8TDX6	532 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	RILPL2	Q969X0	211 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	FAM227B	Q96M60	508 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	SEC62	Q99442	399 aa	Known RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	C17orf80	Q9BSJ5	609 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	SLC26A6	Q9BXS9	759 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	TRIM5	Q9C035	493 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	TP63	Q9H3D4	680 aa	Predicted RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	R3HDML	Q9H3Y0	253 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	UNKL	Q9H9P5	680 aa	Known RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	GALNT9	Q9HCQ5	603 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	INTS13	Q9NVM9	706 aa		4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	VSX1	Q9NZR4	365 aa	Predicted RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	IFT80	Q9P2H3	777 aa	Predicted RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.11	□□□□□ -1.75
SCAPER-213	ENST00000564757	COL4A3	Q01955	1670 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	EFCAB8	A8MWE9	144 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	PRRT4	C9JH25	899 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757		H0Y3Z8	333 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	NDUFA10	O95299	355 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	CFI	P05156	583 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	ANXA6	P08133	673 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	CD19	P15391	556 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	ZFP36	P26651	326 aa	Known RBP	4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	CST5	P28325	142 aa	Predicted RBP	4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	GSTM5	P46439	218 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	GEMIN4	P57678	1058 aa	Known RBP	4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	ACTR2	P61160	394 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	ATP1A4	Q13733	1029 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	CSHL1	Q14406	222 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	GRM4	Q14833	912 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	TIGD2	Q4W5G0	525 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	EPHA10	Q5JZY3	1008 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	ZNF569	Q5MCW4	686 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	NFRKB	Q6P4R8	1299 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	RSRC2	Q7L4I2	434 aa	Known RBP	4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	LRRTM4	Q86VH4	590 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	ESX1	Q8N693	406 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	SCAMP5	Q8TAC9	235 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	SPPL3	Q8TCT6	385 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	HMGB4	Q8WW32	186 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	THAP4	Q8WY91	577 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	CPT1B	Q92523	772 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	SKA1	Q96BD8	255 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	COG8	Q96MW5	612 aa		4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	DPCD	Q9BVM2	203 aa	Predicted RBP	4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	PABPC3	Q9H361	631 aa	Known RBP	4.1	□□□□□ -1.75
SCAPER-213	ENST00000564757	PRDM13	Q9H4Q3	707 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms