RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 RDXP35241 583 aaKnown RBP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 GRIK1P39086 918 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 NDUFV1P49821 464 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 ZNF135P52742 658 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 BCAR1P56945 870 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 CAV1Q03135 178 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 DPYSL2Q16555 572 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 LRRC26Q2I0M4 334 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 SLC39A12Q504Y0 691 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 SH3PXD2AQ5TCZ1 1133 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 MFSD5Q6N075 450 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 CYP4V2Q6ZWL3 525 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 ZNF365Q70YC5 407 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 SND1Q7KZF4 910 aaKnown RBP eCLIP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 BNIPLQ7Z465 357 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 RFX6Q8HWS3 928 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 TOP1MTQ969P6 601 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 PGAP3Q96FM1 320 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 CCDC114Q96M63 670 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 PEBP4Q96S96 227 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 HERPUD2Q9BSE4 406 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 TRIM51Q9BSJ1 452 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 SNRNP25Q9BV90 132 aaKnown RBP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 CALN1Q9BXU9 219 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 TSPYL1Q9H0U9 437 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 COMMD8Q9NX08 183 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 WHRNQ9P202 907 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 MTRF1LQ9UGC7 380 aaKnown RBP16.22■□□□□ 0.19
COMMD4-210ENST00000564587 NLRC5Q86WI3 1866 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 ESYT3A0FGR9 886 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 ZSCAN5CA6NGD5 496 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-210ENST00000564587 F8W810 466 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 ITGAVP06756 1048 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 ITIH2P19823 946 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 TGM2P21980 687 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 KCNJ1P48048 391 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 GATMP50440 423 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 VCPP55072 806 aaKnown RBP16.21■□□□□ 0.19
COMMD4-210ENST00000564587 KRT17Q04695 432 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 CALCOCO2Q13137 446 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 SNX1Q13596 522 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 DPYSL3Q14195 570 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 SPDYCQ5MJ68 293 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 ALS2CLQ60I27 953 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.21■□□□□ 0.19
COMMD4-210ENST00000564587 CEP128Q6ZU80 1094 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 ARHGAP18Q8N392 663 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 SPPL2BQ8TCT7 592 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 NTAN1Q96AB6 310 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 CEP295NLQ96MC4 621 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 RNF157Q96PX1 679 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 TMEM209Q96SK2 561 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 TTPALQ9BTX7 342 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 DPH5Q9H2P9 285 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 FBXO44Q9H4M3 255 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 FAM53CQ9NYF3 392 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 STK39Q9UEW8 545 aa16.21■□□□□ 0.19
COMMD4-210ENST00000564587 R3HDM2Q9Y2K5 976 aaKnown RBP16.21■□□□□ 0.19
COMMD4-210ENST00000564587 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 PATJQ8NI35 1801 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 M0QYT0 321 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 RRP9O43818 475 aaKnown RBP16.2■□□□□ 0.18
COMMD4-210ENST00000564587 ZNF189O75820 626 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-210ENST00000564587 USP17L7P0C7H9 530 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 CACNA2D1P54289 1103 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 DEUP1Q05D60 604 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 GPR17Q13304 367 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 MTMR3Q13615 1198 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 LLGL1Q15334 1064 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 USP41Q3LFD5 358 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 ARL13BQ3SXY8 428 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 GSTA5Q7RTV2 222 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 ANKS1BQ7Z6G8 1248 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 CEP57Q86XR8 500 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 CMTR2Q8IYT2 770 aaKnown RBP16.2■□□□□ 0.18
COMMD4-210ENST00000564587 SLC35B2Q8TB61 432 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 ATG4AQ8WYN0 398 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 ACSF2Q96CM8 615 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-210ENST00000564587 FAF2Q96CS3 445 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 HINFPQ9BQA5 517 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 GPR62Q9BZJ7 368 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 PLEKHA4Q9H4M7 779 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 PCDH18Q9HCL0 1135 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 ABCC13Q9NSE7 274 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 AP4E1Q9UPM8 1137 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 ZNF148Q9UQR1 794 aa16.2■□□□□ 0.18
COMMD4-210ENST00000564587 YJEFN3A6XGL0 299 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 E7ENQ6 273 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 APOL1O14791 398 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 MCF2LO15068 1137 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 TBC1D4O60343 1298 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 UPP2O95045 317 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 RTN3O95197 1032 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-210ENST00000564587 NCAM1P13591 858 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 ATF2P15336 505 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 HSPA9P38646 679 aaKnown RBP16.19■□□□□ 0.18
COMMD4-210ENST00000564587 ARL4AP40617 200 aa16.19■□□□□ 0.18
COMMD4-210ENST00000564587 ANKRD20A8PQ5CZ79 823 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms