RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ENTPD3O75355 529 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SCGB1D1O95968 90 aa5□□□□□ -1.61
SMG1-207ENST00000563235 UQCRHP07919 91 aa5□□□□□ -1.61
SMG1-207ENST00000563235 RXRAP19793 462 aa5□□□□□ -1.61
SMG1-207ENST00000563235 RPL13P26373 211 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 EEF1DP29692 281 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 PPP1R2P41236 205 aa5□□□□□ -1.61
SMG1-207ENST00000563235 GARSP41250 739 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 ZNF157P51786 506 aaPredicted RBP5□□□□□ -1.61
SMG1-207ENST00000563235 CLCNKAP51800 687 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ABATP80404 500 aa5□□□□□ -1.61
SMG1-207ENST00000563235 TBC1D8BQ0IIM8 1120 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ITGA7Q13683 1181 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SNX17Q15036 470 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SEC23AQ15436 765 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PPP1R2P3Q6NXS1 205 aa5□□□□□ -1.61
SMG1-207ENST00000563235 NFRKBQ6P4R8 1299 aa5□□□□□ -1.61
SMG1-207ENST00000563235 BORAQ6PGQ7 559 aa5□□□□□ -1.61
SMG1-207ENST00000563235 USP49Q70CQ1 688 aa5□□□□□ -1.61
SMG1-207ENST00000563235 UBE3BQ7Z3V4 1068 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ANKLE2Q86XL3 938 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SYCP3Q8IZU3 236 aa5□□□□□ -1.61
SMG1-207ENST00000563235 TXLNBQ8N3L3 684 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SMYD1Q8NB12 490 aa5□□□□□ -1.61
SMG1-207ENST00000563235 FBXO18Q8NFZ0 1043 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PTPRN2Q92932 1015 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PEX13Q92968 403 aa5□□□□□ -1.61
SMG1-207ENST00000563235 MR1Q95460 341 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SLC47A1Q96FL8 570 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SH3GL2Q99962 352 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ZKSCAN3Q9BRR0 538 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CDK19Q9BWU1 502 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PINK1Q9BXM7 581 aa5□□□□□ -1.61
SMG1-207ENST00000563235 KCNF1Q9H3M0 494 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ERVK-5Q9HDB9 667 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PALMDQ9NP74 551 aa5□□□□□ -1.61
SMG1-207ENST00000563235 MBIPQ9NS73 344 aa5□□□□□ -1.61
SMG1-207ENST00000563235 DNAJC28Q9NX36 388 aa5□□□□□ -1.61
SMG1-207ENST00000563235 KANSL3Q9P2N6 904 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ASH2LQ9UBL3 628 aa5□□□□□ -1.61
SMG1-207ENST00000563235 IPO11Q9UI26 975 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 PCDHA8Q9Y5H6 950 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CORINQ9Y5Q5 1042 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CYP46A1Q9Y6A2 500 aa5□□□□□ -1.61
SMG1-207ENST00000563235 STRCP1A6NGW2 1772 aa5□□□□□ -1.61
SMG1-207ENST00000563235 KDM5DQ9BY66 1539 aa5□□□□□ -1.61
SMG1-207ENST00000563235 FGD6Q6ZV73 1430 aa5□□□□□ -1.61
SMG1-207ENST00000563235 RNF103-CHMP3A0A140T963 221 aa5□□□□□ -1.61
SMG1-207ENST00000563235 FIGNL2A6NMB9 653 aa5□□□□□ -1.61
SMG1-207ENST00000563235 GOLGA8SH3BPF8 625 aa5□□□□□ -1.61
SMG1-207ENST00000563235 RNF103O00237 685 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PPM1BO75688 479 aa5□□□□□ -1.61
SMG1-207ENST00000563235 FAM155BO75949 473 aa5□□□□□ -1.61
SMG1-207ENST00000563235 IL18RAPO95256 599 aa5□□□□□ -1.61
SMG1-207ENST00000563235 KCNA5P22460 613 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PTGER3P43115 390 aa5□□□□□ -1.61
SMG1-207ENST00000563235 VEGFBP49765 207 aa5□□□□□ -1.61
SMG1-207ENST00000563235 POLGP54098 1239 aaPredicted RBP5□□□□□ -1.61
SMG1-207ENST00000563235 GMFBP60983 142 aa5□□□□□ -1.61
SMG1-207ENST00000563235 YWHAZP63104 245 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 OLR1P78380 273 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PPATQ06203 517 aa5□□□□□ -1.61
SMG1-207ENST00000563235 FAAP100Q0VG06 881 aa5□□□□□ -1.61
SMG1-207ENST00000563235 RNFT1Q5M7Z0 435 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ERMARDQ5T6L9 678 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CDCP2Q5VXM1 449 aa5□□□□□ -1.61
SMG1-207ENST00000563235 MON1AQ86VX9 555 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ERO1BQ86YB8 467 aa5□□□□□ -1.61
SMG1-207ENST00000563235 GALNT4Q8N4A0 578 aa5□□□□□ -1.61
SMG1-207ENST00000563235 GLB1L3Q8NCI6 653 aaPredicted RBP5□□□□□ -1.61
SMG1-207ENST00000563235 CCDC110Q8TBZ0 833 aa5□□□□□ -1.61
SMG1-207ENST00000563235 INPP5DQ92835 1189 aa5□□□□□ -1.61
SMG1-207ENST00000563235 GAL3ST3Q96A11 431 aa5□□□□□ -1.61
SMG1-207ENST00000563235 RPRD1AQ96P16 312 aaPredicted RBP5□□□□□ -1.61
SMG1-207ENST00000563235 TFB2MQ9H5Q4 396 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 NRDE2Q9H7Z3 1164 aa5□□□□□ -1.61
SMG1-207ENST00000563235 INTS13Q9NVM9 706 aa5□□□□□ -1.61
SMG1-207ENST00000563235 TAB2Q9NYJ8 693 aa5□□□□□ -1.61
SMG1-207ENST00000563235 OR6C2Q9NZP2 312 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SELENONQ9NZV5 590 aa5□□□□□ -1.61
SMG1-207ENST00000563235 COX16Q9P0S2 106 aa5□□□□□ -1.61
SMG1-207ENST00000563235 XIRP1Q702N8 1843 aaKnown RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 BUB1O43683 1085 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 PSMD10O75832 226 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 PNPP00491 289 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 CST3P01034 146 aaPredicted RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 LAMP2P13473 410 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 ATP5JP18859 108 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 IL10P22301 178 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 PRKACBP22694 351 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 BMI1P35226 326 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 GGT5P36269 586 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 PMS2P54278 862 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 DAG1Q14118 895 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 GAS6Q14393 721 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 MTFR1Q15390 333 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 DGKDQ16760 1214 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 SGO1Q5FBB7 561 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 TDRD10Q5VZ19 366 aaKnown RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 TANGO2Q6ICL3 276 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms