RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 RAD54L2Q9Y4B4 1467 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 NINLQ9Y2I6 1382 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 ZBED9Q6R2W3 1325 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 SYNRGQ9UMZ2 1314 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 PSMD9O00233 223 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 ADAM10O14672 748 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 CCP110O43303 1012 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 FRS3O43559 492 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 DHX16O60231 1041 aaKnown RBP5.29□□□□□ -1.56
CHD9-206ENST00000562791 MARCH6O60337 910 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 RASSF9O75901 435 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 BMP15O95972 392 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 IL1R1P14778 569 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 EPHA3P29320 983 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 PTDSS1P48651 473 aaKnown RBP5.29□□□□□ -1.56
CHD9-206ENST00000562791 TIRAPP58753 221 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
CHD9-206ENST00000562791 TIAL1Q01085 375 aaKnown RBP eCLIP5.29□□□□□ -1.56
CHD9-206ENST00000562791 ZNF268Q14587 947 aaPredicted RBP5.29□□□□□ -1.56
CHD9-206ENST00000562791 RABEP1Q15276 862 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 CREBRFQ8IUR6 639 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 CHPFQ8IZ52 775 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 LINC01465Q8N7H1 131 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 MAGEB6Q8N7X4 407 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 SUDS3Q9H7L9 328 aaPredicted RBP5.29□□□□□ -1.56
CHD9-206ENST00000562791 TUBA8Q9NY65 449 aaPredicted RBP5.29□□□□□ -1.56
CHD9-206ENST00000562791 TFCP2L1Q9NZI6 479 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 COL20A1Q9P218 1284 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 STK26Q9P289 416 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 ISY1Q9ULR0 285 aaKnown RBP5.29□□□□□ -1.56
CHD9-206ENST00000562791 PAXBP1Q9Y5B6 917 aa5.29□□□□□ -1.56
CHD9-206ENST00000562791 LOC102723971A0A1B0GUV8 181 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 TMEM232C9JQI7 657 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 MPHOSPH10O00566 681 aaKnown RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 RGS10O43665 173 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 GCATO75600 419 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 IPO7O95373 1038 aaKnown RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 IL1R2P27930 398 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 PRKAR1BP31321 381 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 PEX19P40855 299 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 COPB1P53618 953 aaKnown RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 FOXD4Q12950 439 aaPredicted RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 SEC23BQ15437 767 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 NPY5RQ15761 445 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 CNGA2Q16280 664 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 INSCQ1MX18 579 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 ZNF750Q32MQ0 723 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 MINDY4Q4G0A6 757 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 C1QTNF12Q5T7M4 302 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 MEX3CQ5U5Q3 659 aaKnown RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 NXNQ6DKJ4 435 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 ZNF813Q6ZN06 617 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 TCEAL8Q8IYN2 117 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 ADAMTS18Q8TE60 1221 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 TIGD1Q96MW7 591 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 FYTTD1Q96QD9 318 aaKnown RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 FAM118BQ9BPY3 351 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 C1orf112Q9NSG2 853 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 TRNAU1APQ9NX07 287 aaKnown RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 CGNQ9P2M7 1197 aaKnown RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 AFF4Q9UHB7 1163 aaKnown RBP5.28□□□□□ -1.56
CHD9-206ENST00000562791 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 USP22Q9UPT9 525 aa5.28□□□□□ -1.56
CHD9-206ENST00000562791 ISM1B1AKI9 464 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 BTBD19C9JJ37 291 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 PIAS2O75928 621 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 MT-CO3P00414 261 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 MCM5P33992 734 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 NR4A2P43354 598 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 TDO2P48775 406 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 MTHFSP49914 203 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 TRDNQ13061 729 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 PPP2R5AQ15172 486 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 TRIP6Q15654 476 aaKnown RBP5.27□□□□□ -1.57
CHD9-206ENST00000562791 HSP90B2PQ58FF3 399 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 CCDC181Q5TID7 509 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 TECPR1Q7Z6L1 1165 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 SESTD1Q86VW0 696 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 MAFAQ8NHW3 353 aaPredicted RBP5.27□□□□□ -1.57
CHD9-206ENST00000562791 ZNF398Q8TD17 642 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 MID2Q9UJV3 735 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 ASAP1Q9ULH1 1129 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 RIMKLBQ9ULI2 386 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 AFG3L2Q9Y4W6 797 aa5.27□□□□□ -1.57
CHD9-206ENST00000562791 SCRIBQ14160 1630 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 M0R3H8 397 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 EPB41L2O43491 1005 aaKnown RBP5.26□□□□□ -1.57
CHD9-206ENST00000562791 A1BGP04217 495 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 CREB1P16220 341 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 ZKSCAN1P17029 563 aaPredicted RBP5.26□□□□□ -1.57
CHD9-206ENST00000562791 ATF7P17544 494 aaPredicted RBP5.26□□□□□ -1.57
CHD9-206ENST00000562791 ACVR2AP27037 513 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 HOXD9P28356 352 aaPredicted RBP5.26□□□□□ -1.57
CHD9-206ENST00000562791 KCNJ4P48050 445 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 PGDP52209 483 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 FMO1Q01740 532 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 GABPB1Q06547 395 aaPredicted RBP5.26□□□□□ -1.57
CHD9-206ENST00000562791 MAPK7Q13164 816 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 ARHGEF7Q14155 803 aa5.26□□□□□ -1.57
CHD9-206ENST00000562791 LARS2Q15031 903 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms