RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 GJA4P35212 333 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 STILQ15468 1287 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 KLHL40Q2TBA0 621 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 PM20D1Q6GTS8 502 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 DENND1BQ6P3S1 775 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 DDX42Q86XP3 938 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 CPA6Q8N4T0 437 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 KCTD13Q8WZ19 329 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 ATP2A3Q93084 1043 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 KLF16Q9BXK1 252 aaPredicted RBP16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 FHOD1Q9Y613 1164 aa16.16■□□□□ 0.18
CCNDBP1-203ENST00000562553 PRR23AA6NEV1 266 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 FOXN3O00409 490 aaPredicted RBP16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 THAP12O43422 761 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 LCP1P13796 627 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 ZNF18P17022 549 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 ATP5C1P36542 298 aaKnown RBP16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 PSEN1P49768 467 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 KLK7P49862 253 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 COPB1P53618 953 aaKnown RBP16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 YWHAGP61981 247 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 ANGPT1Q15389 498 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 C10orf120Q5SQS8 335 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 RIF1Q5UIP0 2472 aaKnown RBP16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 KLHDC7AQ5VTJ3 777 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 ASCL5Q7RTU5 278 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 ZNF606Q8WXB4 792 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 FUCA2Q9BTY2 467 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 LMAN1LQ9HAT1 526 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 CLIC5Q9NZA1 410 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 SH3BP1Q9Y3L3 701 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 KIAA1549LQ6ZVL6 1849 aa16.15■□□□□ 0.18
CCNDBP1-203ENST00000562553 E2F8A0AVK6 867 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 YJEFN3A6XGL0 299 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 E7ENQ6 273 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 NCAM2O15394 837 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 GREM1O60565 184 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 NFATC1O95644 943 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 CYP17A1P05093 508 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 RALAP11233 206 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 GPD2P43304 727 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 RPS9P46781 194 aaKnown RBP16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 DAOAP59103 153 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 RAPGEF1Q13905 1077 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 GAB4Q2WGN9 574 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 KLHDC10Q6PID8 442 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 C1orf228Q6PIY5 440 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 BBS7Q8IWZ6 715 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 SIX6OS1Q8N1H7 587 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 ZNF276Q8N554 614 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 KIAA1958Q8N8K9 716 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 CLEC4CQ8WTT0 213 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 NAA15Q9BXJ9 866 aaKnown RBP16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 GANQ9H2C0 597 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 CHRDQ9H2X0 955 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 FBRSL1Q9HCM7 1045 aaKnown RBP16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 LIMA1Q9UHB6 759 aaKnown RBP16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 CYTH4Q9UIA0 394 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 RASAL2Q9UJF2 1139 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 DNMT3LQ9UJW3 386 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 FAM186AA6NE01 2351 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 FANCMQ8IYD8 2048 aa16.14■□□□□ 0.17
CCNDBP1-203ENST00000562553 PTPRZ1P23471 2315 aaPredicted RBP16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 SYCE3A1L190 88 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 SLC9A3R1O14745 358 aaPredicted RBP16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 ATP1A3P13637 1013 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 CLCN1P35523 988 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 MAGEA9P43362 315 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 EFEMP1Q12805 493 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 GAS6Q14393 721 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 DRAP1Q14919 205 aaPredicted RBP16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 DHCR24Q15392 516 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 TMEM196Q5HYL7 178 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 FSTL4Q6MZW2 842 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 Q6ZS52 159 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 APTXQ7Z2E3 356 aaKnown RBP16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 MIB1Q86YT6 1006 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 C1orf210Q8IVY1 113 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 FAM71AQ8IYT1 594 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 MAML2Q8IZL2 1156 aaPredicted RBP16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 ADGRG2Q8IZP9 1017 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 ARHGAP18Q8N392 663 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 NKD2Q969F2 451 aaPredicted RBP16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 HSFY1Q96LI6 401 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 CNGB3Q9NQW8 809 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 SPATA6Q9NWH7 488 aaPredicted RBP16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 WDR87Q6ZQQ6 2873 aa16.13■□□□□ 0.17
CCNDBP1-203ENST00000562553 TRDMT1O14717 391 aaKnown RBP16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 EPHB6O15197 1021 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 MED7O43513 233 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 STC2O76061 302 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 UCHL3P15374 230 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 OPRD1P41143 372 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 RPL34P49207 117 aaKnown RBP16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 GALK1P51570 392 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 MTAPQ13126 283 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 CCINQ13939 588 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 MEA1Q16626 185 aa16.12■□□□□ 0.17
CCNDBP1-203ENST00000562553 BSPRYQ5W0U4 402 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms