RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SART1O43290 800 aaKnown RBP17.53■□□□□ 0.4
CLK3-207ENST00000562389 MLLT6P55198 1093 aaPredicted RBP17.53■□□□□ 0.4
CLK3-207ENST00000562389 STARD6P59095 220 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 PDGFRLQ15198 375 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 IER5LQ5T953 404 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 BSPRYQ5W0U4 402 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 BTBD8Q5XKL5 378 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 HFE2Q6ZVN8 426 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 FMNL3Q8IVF7 1028 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 TMEM35BQ8NCS4 154 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 CSGALNACT1Q8TDX6 532 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 CLEC4CQ8WTT0 213 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 BAP1Q92560 729 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 PBXIP1Q96AQ6 731 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 SHDQ96IW2 340 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 KLF16Q9BXK1 252 aaPredicted RBP17.53■□□□□ 0.4
CLK3-207ENST00000562389 TTYH3Q9C0H2 523 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 HEBP1Q9NRV9 189 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 GKN1Q9NS71 199 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 ABCC13Q9NSE7 274 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
CLK3-207ENST00000562389 IFNKQ9P0W0 207 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 CFAP97Q9P2B7 532 aa17.53■□□□□ 0.4
CLK3-207ENST00000562389 COL4A3Q01955 1670 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 E2F8A0AVK6 867 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 LSM8O95777 96 aaKnown RBP17.52■□□□□ 0.4
CLK3-207ENST00000562389 PDGFBP01127 241 aaPredicted RBP17.52■□□□□ 0.4
CLK3-207ENST00000562389 GLULP15104 373 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 CDR2Q01850 454 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 GOLGA8FQ08AF8 430 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 GOLGA8DPQ0D2H9 430 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 FIGNQ5HY92 759 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 TAF3Q5VWG9 929 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 RNF214Q8ND24 703 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 TTC16Q8NEE8 873 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 MSANTD3Q96H12 275 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 PPP1R13BQ96KQ4 1090 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 CPXM1Q96SM3 734 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 LRFN3Q9BTN0 628 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 DDX23Q9BUQ8 820 aaKnown RBP17.52■□□□□ 0.4
CLK3-207ENST00000562389 EDEM3Q9BZQ6 932 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 MIS12Q9H081 205 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 PDCL3Q9H2J4 239 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 MFSD1Q9H3U5 465 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 HPS4Q9NQG7 708 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 DUS2Q9NX74 493 aaKnown RBP17.52■□□□□ 0.4
CLK3-207ENST00000562389 NUDT5Q9UKK9 219 aa17.52■□□□□ 0.4
CLK3-207ENST00000562389 SLC9A3R1O14745 358 aaPredicted RBP17.51■□□□□ 0.39
CLK3-207ENST00000562389 MDM4O15151 490 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 PAPSS1O43252 624 aaPredicted RBP17.51■□□□□ 0.39
CLK3-207ENST00000562389 LTFP02788 710 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 TPM3P06753 285 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 MMEP08473 750 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 IFNAR2P48551 515 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 SNX16P57768 344 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 FMO1Q01740 532 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 TNK2Q07912 1038 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 RUNX3Q13761 415 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 EML3Q32P44 896 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 PTPN20Q4JDL3 420 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 CWF19L1Q69YN2 538 aaKnown RBP17.51■□□□□ 0.39
CLK3-207ENST00000562389 TRIM68Q6AZZ1 485 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 TPRG1Q6ZUI0 275 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 RSRC2Q7L4I2 434 aaKnown RBP17.51■□□□□ 0.39
CLK3-207ENST00000562389 SCUBE3Q8IX30 993 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 KMT2EQ8IZD2 1858 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 FBXL6Q8N531 539 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 IPO4Q8TEX9 1081 aaKnown RBP17.51■□□□□ 0.39
CLK3-207ENST00000562389 SLC20A1Q8WUM9 679 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 GOLGA1Q92805 767 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 ATP2A3Q93084 1043 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 NUP58Q9BVL2 599 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 EBF3Q9H4W6 596 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 C8orf33Q9H7E9 229 aaPredicted RBP17.51■□□□□ 0.39
CLK3-207ENST00000562389 TBC1D17Q9HA65 648 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 GTSE1Q9NYZ3 720 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 RASAL2Q9UJF2 1139 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 SH3BP1Q9Y3L3 701 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 WNT6Q9Y6F9 365 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 PIAS3Q9Y6X2 628 aa17.51■□□□□ 0.39
CLK3-207ENST00000562389 CBFA2T2O43439 604 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 CCDC172P0C7W6 258 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 ARSAP15289 507 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 FERP16591 822 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 NOMO3P69849 1222 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 COG7P83436 770 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 EFEMP1Q12805 493 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 ITPRIPL2Q3MIP1 535 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 MSANTD2Q6P1R3 559 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 C1orf228Q6PIY5 440 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 BEND5Q7L4P6 421 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 RNF139Q8WU17 664 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 EDEM1Q92611 657 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 IQCDQ96DY2 449 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 TRIM62Q9BVG3 475 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 XPO4Q9C0E2 1151 aaKnown RBP17.5■□□□□ 0.39
CLK3-207ENST00000562389 MARCH2Q9P0N8 246 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 TBC1D14Q9P2M4 693 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 TJP2Q9UDY2 1190 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 STRIP2Q9ULQ0 834 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms