RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 TOGARAM2Q6ZUX3 1019 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 RSRC2Q7L4I2 434 aaKnown RBP17.15■□□□□ 0.34
USB1-204ENST00000561568 BHLHA9Q7RTU4 235 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 ZNF571Q7Z3V5 609 aaPredicted RBP17.15■□□□□ 0.34
USB1-204ENST00000561568 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
USB1-204ENST00000561568 MFSD6LQ8IWD5 586 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
USB1-204ENST00000561568 SLC22A12Q96S37 553 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 ASNSD1Q9NWL6 643 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 THG1LQ9NWX6 298 aaKnown RBP17.15■□□□□ 0.34
USB1-204ENST00000561568 ARHGAP26Q9UNA1 814 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 GOLGA6L3A6NEY3 463 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 HEPACAM2A8MVW5 462 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 MFAP3LO75121 409 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 ERBB2P04626 1255 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 TCF3P15923 654 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 PSMC3P17980 439 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 FCARP24071 287 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 CDC25BP30305 580 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 SCNN1AP37088 669 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 ADKP55263 362 aaKnown RBP17.14■□□□□ 0.33
USB1-204ENST00000561568 COG7P83436 770 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 CENPCQ03188 943 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 TDRD12Q587J7 1177 aaKnown RBP17.14■□□□□ 0.33
USB1-204ENST00000561568 PHF13Q86YI8 300 aaPredicted RBP17.14■□□□□ 0.33
USB1-204ENST00000561568 KIAA1958Q8N8K9 716 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 SLC30A5Q8TAD4 765 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 BPIFB1Q8TDL5 484 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 CLEC4CQ8WTT0 213 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 RSAD2Q8WXG1 361 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 FAM149B1Q96BN6 582 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 VCPIP1Q96JH7 1222 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 NECAB3Q96P71 396 aaPredicted RBP17.14■□□□□ 0.33
USB1-204ENST00000561568 RPP25Q9BUL9 199 aaKnown RBP17.14■□□□□ 0.33
USB1-204ENST00000561568 TRMT61BQ9BVS5 477 aaKnown RBP17.14■□□□□ 0.33
USB1-204ENST00000561568 POPDC2Q9HBU9 364 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 CD320Q9NPF0 282 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 ABHD10Q9NUJ1 306 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 WDR35Q9P2L0 1181 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 STRIP2Q9ULQ0 834 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 SORCS3Q9UPU3 1222 aa17.14■□□□□ 0.33
USB1-204ENST00000561568 SPTBN5Q9NRC6 3674 aaKnown RBP17.14■□□□□ 0.33
USB1-204ENST00000561568 PATJQ8NI35 1801 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 CAPN9O14815 690 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 TBX18O95935 607 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 CALB1P05937 261 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 ASGR2P07307 311 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 GOLGA8FQ08AF8 430 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 GOLGA8DPQ0D2H9 430 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.13■□□□□ 0.33
USB1-204ENST00000561568 YAF2Q8IY57 180 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 KXD1Q9BQD3 176 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.13■□□□□ 0.33
USB1-204ENST00000561568 PLA2G2FQ9BZM2 168 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 SMG9Q9H0W8 520 aaKnown RBP17.13■□□□□ 0.33
USB1-204ENST00000561568 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 TJP2Q9UDY2 1190 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 ADAMTS1Q9UHI8 967 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 CPQQ9Y646 472 aa17.13■□□□□ 0.33
USB1-204ENST00000561568 DOCK8Q8NF50 2099 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 DDX3XO00571 662 aaKnown RBP eCLIP17.12■□□□□ 0.332e-15■■■■■ 27.4
USB1-204ENST00000561568 HSF2BPO75031 334 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 RTN2O75298 545 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 PRAMEF12O95522 483 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 NCAM1P13591 858 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 KPNA1P52294 538 aaPredicted RBP17.12■□□□□ 0.33
USB1-204ENST00000561568 CDK17Q00537 523 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
USB1-204ENST00000561568 CC2D1AQ6P1N0 951 aaPredicted RBP17.12■□□□□ 0.33
USB1-204ENST00000561568 WDR59Q6PJI9 974 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 OLFML1Q6UWY5 402 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 VITQ6UXI7 678 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 HFE2Q6ZVN8 426 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 FAM183BPQ6ZVS7 135 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 SLC26A9Q7LBE3 791 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 XYLT1Q86Y38 959 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 UBALD2Q8IYN6 164 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
USB1-204ENST00000561568 SH3RF2Q8TEC5 729 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 EDEM1Q92611 657 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 KLF16Q9BXK1 252 aaPredicted RBP17.12■□□□□ 0.33
USB1-204ENST00000561568 GRPEL1Q9HAV7 217 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 MARCH2Q9P0N8 246 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 ARHGAP20Q9P2F6 1191 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 NUDT5Q9UKK9 219 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 CCL26Q9Y258 94 aa17.12■□□□□ 0.33
USB1-204ENST00000561568 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 SSU72P8A0A1W2PR75 194 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 LEFTY2O00292 366 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 ZNF263O14978 683 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 CHADO15335 359 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 FTLP02792 175 aaPredicted RBP17.11■□□□□ 0.33
USB1-204ENST00000561568 FYNP06241 537 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 FCHO2Q0JRZ9 810 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 EFEMP1Q12805 493 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 MMS22LQ6ZRQ5 1243 aa17.11■□□□□ 0.33
USB1-204ENST00000561568 ARCQ7LC44 396 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms