RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PNPLA8Q9NP80 782 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 HPS4Q9NQG7 708 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 RBM12Q9NTZ6 932 aaKnown RBP10.63□□□□□ -0.71
HERC1-212ENST00000561348 IL37Q9NZH6 218 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 DNMT3LQ9UJW3 386 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 LSM7Q9UK45 103 aaKnown RBP10.63□□□□□ -0.71
HERC1-212ENST00000561348 SLC12A8A0AV02 714 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 OTOL1A6NHN0 477 aaPredicted RBP10.62□□□□□ -0.71
HERC1-212ENST00000561348 YJEFN3A6XGL0 299 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 E7ENQ6 273 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 GOLGA6L19H0YKK7 550 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 SLC9A3R1O14745 358 aaPredicted RBP10.62□□□□□ -0.71
HERC1-212ENST00000561348 GFPT2O94808 682 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 NFATC1O95644 943 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 SERPINC1P01008 464 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 PFKLP17858 780 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 PLA2G4AP47712 749 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 PSEN1P49768 467 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 ZNF132P52740 706 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 AMPD2Q01433 879 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 USP4Q13107 963 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 SKOR2Q2VWA4 1001 aaPredicted RBP10.62□□□□□ -0.71
HERC1-212ENST00000561348 EML3Q32P44 896 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 FILIP1LQ4L180 1135 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 NAIF1Q69YI7 327 aaPredicted RBP10.62□□□□□ -0.71
HERC1-212ENST00000561348 TPGS1Q6ZTW0 290 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 CCDC186Q7Z3E2 898 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 SLC47A2Q86VL8 602 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 RALGPS2Q86X27 583 aaPredicted RBP10.62□□□□□ -0.71
HERC1-212ENST00000561348 DDX42Q86XP3 938 aaKnown RBP eCLIP10.62□□□□□ -0.71
HERC1-212ENST00000561348 BBS7Q8IWZ6 715 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 DHX40Q8IX18 779 aaKnown RBP10.62□□□□□ -0.71
HERC1-212ENST00000561348 CCDC105Q8IYK2 499 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 CLEC4CQ8WTT0 213 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 SHC3Q92529 594 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 WBP2Q969T9 261 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 SPAG5Q96R06 1193 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 SEPT11Q9NVA2 429 aaKnown RBP10.62□□□□□ -0.71
HERC1-212ENST00000561348 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.62□□□□□ -0.71
HERC1-212ENST00000561348 MARCH2Q9P0N8 246 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 SFMBT1Q9UHJ3 866 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 STRIP2Q9ULQ0 834 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 CEP83Q9Y592 693 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 MIA3Q5JRA6 1907 aa10.62□□□□□ -0.71
HERC1-212ENST00000561348 PATJQ8NI35 1801 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 HELZP42694 1942 aaKnown RBP10.61□□□□□ -0.71
HERC1-212ENST00000561348 SYNJ2BP-COX16A0A087WUM0 186 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 FAM92AA1XBS5 289 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 ARNTLO00327 626 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 CAPN9O14815 690 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 LAMTOR5O43504 91 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 GALR2O43603 387 aaPredicted RBP10.61□□□□□ -0.71
HERC1-212ENST00000561348 ZDHHC11BP0C7U3 371 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 GLULP15104 373 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 UCHL3P15374 230 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 GJA4P35212 333 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 GALK1P51570 392 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 KDSRQ06136 332 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 GRSF1Q12849 480 aaKnown RBP eCLIP10.61□□□□□ -0.71
HERC1-212ENST00000561348 NCAPHQ15003 741 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 ZSCAN23Q3MJ62 389 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 RAB41Q5JT25 222 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 BSPRYQ5W0U4 402 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 CACNA2D4Q7Z3S7 1137 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 LUZP1Q86V48 1076 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 PRSS33Q8NF86 280 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 SLC35F5Q8WV83 523 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 CHFRQ96EP1 664 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 UBXN6Q9BZV1 441 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 TRPV5Q9NQA5 729 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 COX16Q9P0S2 106 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 LIMA1Q9UHB6 759 aaKnown RBP10.61□□□□□ -0.71
HERC1-212ENST00000561348 USP3Q9Y6I4 520 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 ATG2BQ96BY7 2078 aa10.61□□□□□ -0.71
HERC1-212ENST00000561348 KMT2EQ8IZD2 1858 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 E2F8A0AVK6 867 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 LGALS16A8MUM7 142 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 E5RJQ4 531 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 MSI1O43347 362 aaKnown RBP10.6□□□□□ -0.71
HERC1-212ENST00000561348 GRAP2O75791 330 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 OLFM2O95897 454 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 ADH1CP00326 375 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 LTFP02788 710 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CYP17A1P05093 508 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 NCAM1P13591 858 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CLCN1P35523 988 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 GPD2P43304 727 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 TUBP50607 506 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 SEC13P55735 322 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 DAOAP59103 153 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 BPIFB4P59827 614 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CSTF1Q05048 431 aaKnown RBP10.6□□□□□ -0.71
HERC1-212ENST00000561348 LRRC32Q14392 662 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 ANGPT1Q15389 498 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 DHCR24Q15392 516 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 LY6G5CQ5SRR4 150 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 SNX30Q5VWJ9 437 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 OR6B2Q6IFH4 312 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 TSSK4Q6SA08 328 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 DENND1CQ8IV53 801 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms