RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SPATA17Q96L03 361 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 CEP295NLQ96MC4 621 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 SLITRK1Q96PX8 696 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 ARHGAP9Q9BRR9 750 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 TIPINQ9BVW5 301 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 ACE2Q9BYF1 805 aaPredicted RBP10.17□□□□□ -0.78
HERC1-210ENST00000560897 NACA2Q9H009 215 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 RNF38Q9H0F5 515 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 TMEM60Q9H2L4 133 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 OSGEPQ9NPF4 335 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 GJB4Q9NTQ9 266 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 DDX19AQ9NUU7 478 aaKnown RBP10.17□□□□□ -0.78
HERC1-210ENST00000560897 ORC3Q9UBD5 711 aaPredicted RBP10.17□□□□□ -0.78
HERC1-210ENST00000560897 MAGEC2Q9UBF1 373 aaPredicted RBP10.17□□□□□ -0.78
HERC1-210ENST00000560897 ADAMTS1Q9UHI8 967 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 HCN2Q9UL51 889 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 DNM3Q9UQ16 869 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 C2CD2Q9Y426 696 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 UBR5O95071 2799 aaPredicted RBP10.17□□□□□ -0.78
HERC1-210ENST00000560897 NBPF19A0A087WUL8 3843 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 MYH10P35580 1976 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 A0A1B0GTQ1 180 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 SFI1A8K8P3 1242 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 KCNJ18B7U540 433 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 TRIM66O15016 1216 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 TRIM24O15164 1050 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 OLFM2O95897 454 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 OAS1P00973 400 aaKnown RBP10.16□□□□□ -0.78
HERC1-210ENST00000560897 AFPP02771 609 aaKnown RBP10.16□□□□□ -0.78
HERC1-210ENST00000560897 OR52Z1P0C646 297 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 CTSKP43235 329 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 ERVPABLB-1P60509 514 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 GABREP78334 506 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 IFRD2Q12894 506 aaPredicted RBP10.16□□□□□ -0.78
HERC1-210ENST00000560897 E2F5Q15329 346 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 SGO2Q562F6 1265 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 TDRD10Q5VZ19 366 aaKnown RBP10.16□□□□□ -0.78
HERC1-210ENST00000560897 LAYNQ6UX15 382 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 VSTM1Q6UX27 236 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 BBS7Q8IWZ6 715 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 DAW1Q8N136 415 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 TMEM86AQ8N2M4 240 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 EID2Q8N6I1 236 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 TMEM161BQ8NDZ6 487 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 UCMAQ8WVF2 138 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 SPOCK2Q92563 424 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 CCDC97Q96F63 343 aaPredicted RBP10.16□□□□□ -0.78
HERC1-210ENST00000560897 HIC2Q96JB3 615 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.16□□□□□ -0.78
HERC1-210ENST00000560897 BBS2Q9BXC9 721 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 HAPLN2Q9GZV7 340 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 MKRN2Q9H000 416 aaKnown RBP10.16□□□□□ -0.78
HERC1-210ENST00000560897 ASB7Q9H672 318 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 THSD1Q9NS62 852 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 SNX14Q9Y5W7 946 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 STON1Q9Y6Q2 735 aa10.16□□□□□ -0.78
HERC1-210ENST00000560897 WASH3PC4AMC7 463 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 PRRT4C9JH25 899 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 NPC1O15118 1278 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 FSBPO95073 299 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 MPOP05164 745 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 ADRB2P07550 413 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 PLS3P13797 630 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 LHX1P48742 406 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 DGKGP49619 791 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 BCAT1P54687 386 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 CDH8P55286 799 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 CCDC81Q6ZN84 652 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 TMEM25Q86YD3 366 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 DCBLD1Q8N8Z6 715 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 RFFLQ8WZ73 363 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 MMS19Q96T76 1030 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 ELF4Q99607 663 aaPredicted RBP10.15□□□□□ -0.78
HERC1-210ENST00000560897 NTPCRQ9BSD7 190 aaKnown RBP10.15□□□□□ -0.78
HERC1-210ENST00000560897 RUSC1Q9BVN2 902 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 C6orf106Q9H6K1 298 aaPredicted RBP10.15□□□□□ -0.78
HERC1-210ENST00000560897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.15□□□□□ -0.78
HERC1-210ENST00000560897 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 PPP4R2Q9NY27 417 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 WDR35Q9P2L0 1181 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 L1RE1Q9UN81 338 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 SRPK3Q9UPE1 567 aa10.15□□□□□ -0.78
HERC1-210ENST00000560897 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.15□□□□□ -0.78
HERC1-210ENST00000560897 LRRK2Q5S007 2527 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 PTPRJQ12913 1337 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 K7ENP7 123 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 CACNG3O60359 315 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 MT-CO3P00414 261 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 IGLV3-19P01714 112 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 IRF1P10914 325 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 TYRP14679 529 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 CR2P20023 1033 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 BDNFP23560 247 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 CD27P26842 260 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 CCR10P46092 362 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 ARRB1P49407 418 aaPredicted RBP10.14□□□□□ -0.79
HERC1-210ENST00000560897 FOSBP53539 338 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 USP46P62068 366 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 NFKB2Q00653 900 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 E2F1Q01094 437 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms