RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 BTBD8Q5XKL5 378 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 ARL6IP4Q66PJ3 421 aaKnown RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 KIAA1324Q6UXG2 1013 aaKnown RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 DPH6Q7L8W6 267 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 C1orf216Q8TAB5 229 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 TOE1Q96GM8 510 aaKnown RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 HPDLQ96IR7 371 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 AK8Q96MA6 479 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 DCBLD2Q96PD2 775 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 SLITRK1Q96PX8 696 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 CBWD1Q9BRT8 395 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 FGFBP2Q9BYJ0 223 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 PRORYQ9H606 182 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 CCSER2Q9H7U1 834 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 WSB2Q9NYS7 404 aaPredicted RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 EHD2Q9NZN4 543 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 USP36Q9P275 1121 aaKnown RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 CKAP5Q14008 2032 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 NEDD8-MDP1E9PL57 170 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 TK2O00142 265 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 TULP1O00294 542 aaPredicted RBP10.52□□□□□ -0.73
TPM1-225ENST00000560679 CLDN5O00501 218 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 FLRT2O43155 660 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 TMEM191BP0C7N4 346 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 IRF1P10914 325 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 YWHAQP27348 245 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 MATKP42679 507 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 PGFP49763 221 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 SMAD1Q15797 465 aaKnown RBP10.52□□□□□ -0.73
TPM1-225ENST00000560679 PTPRNQ16849 979 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 HLA-BQ31612 363 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 FUT11Q495W5 492 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 PREPLQ4J6C6 727 aaPredicted RBP10.52□□□□□ -0.73
TPM1-225ENST00000560679 L1TD1Q5T7N2 865 aaKnown RBP10.52□□□□□ -0.73
TPM1-225ENST00000560679 DCAF12L1Q5VU92 463 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 ZNF843Q8N446 348 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 CACTINQ8WUQ7 758 aaKnown RBP10.52□□□□□ -0.73
TPM1-225ENST00000560679 LARP4BQ92615 738 aaKnown RBP10.52□□□□□ -0.73
TPM1-225ENST00000560679 FBXO32Q969P5 355 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 CALML4Q96GE6 196 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 MRPL45Q9BRJ2 306 aaKnown RBP10.52□□□□□ -0.73
TPM1-225ENST00000560679 GPR174Q9BXC1 333 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 MKRN2Q9H000 416 aaKnown RBP10.52□□□□□ -0.73
TPM1-225ENST00000560679 MIR1-1HGQ9H1L0 117 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 INTS13Q9NVM9 706 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.52□□□□□ -0.73
TPM1-225ENST00000560679 SH3BP1Q9Y3L3 701 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 PCDHGB2Q9Y5G2 931 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 KNL1Q8NG31 2342 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 CABIN1Q9Y6J0 2220 aa10.52□□□□□ -0.73
TPM1-225ENST00000560679 A0A1B0GVT2 93 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 PLK4O00444 970 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 BCAT2O15382 392 aaPredicted RBP10.51□□□□□ -0.73
TPM1-225ENST00000560679 TLX3O43711 291 aaPredicted RBP10.51□□□□□ -0.73
TPM1-225ENST00000560679 HSP90AA1P07900 732 aaKnown RBP10.51□□□□□ -0.73
TPM1-225ENST00000560679 CISD3P0C7P0 127 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 TYRP14679 529 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 GARTP22102 1010 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 TUBP50607 506 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 MYO1EQ12965 1108 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 HECTD3Q5T447 861 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 SNX30Q5VWJ9 437 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 PCSK4Q6UW60 755 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 HS2ST1Q7LGA3 356 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 METTL3Q86U44 580 aaKnown RBP10.51□□□□□ -0.73
TPM1-225ENST00000560679 GALNT15Q8N3T1 639 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
TPM1-225ENST00000560679 SCAMP5Q8TAC9 235 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 OVCA2Q8WZ82 227 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 CDC6Q99741 560 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 BBS2Q9BXC9 721 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 B3GNT5Q9BYG0 378 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 ELOVL4Q9GZR5 314 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 MARK1Q9P0L2 795 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 TBC1D7Q9P0N9 293 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 GMIPQ9P107 970 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 RAI2Q9Y5P3 530 aa10.51□□□□□ -0.73
TPM1-225ENST00000560679 TP53BP1Q12888 1972 aaPredicted RBP10.51□□□□□ -0.73
TPM1-225ENST00000560679 FAM92AA1XBS5 289 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 GFRA2O00451 464 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 ZBTB24O43167 697 aaPredicted RBP10.5□□□□□ -0.73
TPM1-225ENST00000560679 IGLV3-19P01714 112 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 ZDHHC11BP0C7U3 371 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 PTPN1P18031 435 aaKnown RBP10.5□□□□□ -0.73
TPM1-225ENST00000560679 UBA7P41226 1012 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 TPMTP51580 245 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 SLC5A3P53794 718 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 CLDN6P56747 220 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 NUMA1Q14980 2115 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 LARP1BQ659C4 914 aaKnown RBP10.5□□□□□ -0.73
TPM1-225ENST00000560679 MCTP1Q6DN14 999 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 SDE2Q6IQ49 451 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 IL27RAQ6UWB1 636 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 DHRS13Q6UX07 377 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 LAYNQ6UX15 382 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 NUDT18Q6ZVK8 323 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 DYMQ7RTS9 669 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 NUP93Q8N1F7 819 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms