RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PTPN18Q99952 460 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 FAM118BQ9BPY3 351 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 CALN1Q9BXU9 219 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 EIF2AQ9BY44 585 aaKnown RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 KLC2Q9H0B6 622 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 FAM49AQ9H0Q0 323 aaPredicted RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 ZNF408Q9H9D4 720 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 VPS37BQ9H9H4 285 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 PCDH18Q9HCL0 1135 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 CHST12Q9NRB3 414 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.11□□□□□ -0.79
RTF1-206ENST00000560447 SLC38A7Q9NVC3 462 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 PCSK1NQ9UHG2 260 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 USP15Q9Y4E8 981 aaPredicted RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 TRIP12Q14669 1992 aaPredicted RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 SCN10AQ9Y5Y9 1956 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TRDMT1O14717 391 aaKnown RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 TRIM66O15016 1216 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TM9SF1O15321 606 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 PAPSS1O43252 624 aaPredicted RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 DNAJC8O75937 253 aaPredicted RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 ZWINTO95229 277 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 VIMP08670 466 aaKnown RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 ETS1P14921 441 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TPSB2P20231 275 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 GCAP28676 217 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 GBP2P32456 591 aaPredicted RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 DYNLT1P63172 113 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 CDK16Q00536 496 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 ORC1Q13415 861 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 SPARCL1Q14515 664 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TMED2Q15363 201 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TPSAB1Q15661 275 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 GPR162Q16538 588 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 ANKRD20A8PQ5CZ79 823 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 UBXN11Q5T124 520 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 RNF187Q5TA31 235 aaPredicted RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 CYP4F22Q6NT55 531 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TRNP1Q6NT89 227 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 RPAINQ86UA6 219 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 RSPH3Q86UC2 560 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 UNC45BQ8IWX7 931 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 PALM2Q8IXS6 379 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TMEM86AQ8N2M4 240 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 MICALL1Q8N3F8 863 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 PLD5Q8N7P1 536 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 DENND1AQ8TEH3 1009 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 KBTBD7Q8WVZ9 684 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 ACSF2Q96CM8 615 aaPredicted RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 PPP1R16BQ96T49 567 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 CYTH2Q99418 400 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 SNRNP25Q9BV90 132 aaKnown RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 TRABDQ9H4I3 376 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 RABEP2Q9H5N1 569 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 CDHR5Q9HBB8 845 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 KCNK9Q9NPC2 374 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TMEM51Q9NW97 253 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 RRN3Q9NYV6 651 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TUBGCP4Q9UGJ1 667 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 PIN4Q9Y237 131 aaKnown RBP10.1□□□□□ -0.79
RTF1-206ENST00000560447 RAD54BQ9Y620 910 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 TSC2P49815 1807 aa10.1□□□□□ -0.79
RTF1-206ENST00000560447 IQANK1A0A1B0GTG1 560 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 CFAP73A6NFT4 308 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 H7C0C1 242 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 M0QZ92 97 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 ADCY6O43306 1168 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 DUSP11O75319 330 aaKnown RBP10.09□□□□□ -0.79
RTF1-206ENST00000560447 DAB1O75553 588 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 GCATO75600 419 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 FBXO21O94952 628 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 CELF2O95319 508 aaKnown RBP10.09□□□□□ -0.79
RTF1-206ENST00000560447 ASMTLO95671 621 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 ZBED1O96006 694 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 CD48P09326 243 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 AKR1A1P14550 325 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 IL4RP24394 825 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 MATKP42679 507 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 ATP5OP48047 213 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 LIG3P49916 1009 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 GDF10P55107 478 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 GPX6P59796 221 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 CCDC15Q0P6D6 951 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 MTFR1Q15390 333 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 C15orf59Q2T9L4 293 aaPredicted RBP10.09□□□□□ -0.79
RTF1-206ENST00000560447 SPDYAQ5MJ70 313 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 RNF43Q68DV7 783 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 C17orf99Q6UX52 265 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 CYS1Q717R9 158 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 SRRM1Q8IYB3 904 aaKnown RBP10.09□□□□□ -0.79
RTF1-206ENST00000560447 ADGRF2Q8IZF7 708 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 CYP4X1Q8N118 509 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 PQLC3Q8N755 202 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 C12orf29Q8N999 325 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 FAM71DQ8N9W8 422 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 DNAJB3Q8WWF6 145 aa10.09□□□□□ -0.79
RTF1-206ENST00000560447 C18orf25Q96B23 403 aaPredicted RBP10.09□□□□□ -0.79
RTF1-206ENST00000560447 SLC9A7Q96T83 725 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms