RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TRIM65Q6PJ69 517 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 LCLAT1Q6UWP7 414 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 C12orf40Q86WS4 652 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 MIB1Q86YT6 1006 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 CD101Q93033 1021 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 IER2Q9BTL4 223 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 THAP9Q9H5L6 903 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 ACP6Q9NPH0 428 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 HESX1Q9UBX0 185 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 AJAP1Q9UKB5 411 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 KIAA1257Q9ULG3 409 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 SH3BP1Q9Y3L3 701 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 K7ESF4 209 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 PIK3R2O00459 728 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 RNF40O75150 1001 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 ZBED1O96006 694 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 KRT5P13647 590 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 ERCC5P28715 1186 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 PLA2G4AP47712 749 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 RGS7P49802 495 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 CCR3P51677 355 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 YWHAGP61981 247 aaKnown RBP eCLIP12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 AMPD2Q01433 879 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 ADIGQ0VDE8 80 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 NR1H3Q13133 447 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 CNGA2Q16280 664 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 LY6G5CQ5SRR4 150 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 PM20D1Q6GTS8 502 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 PMF1Q6P1K2 205 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 RBM43Q6ZSC3 357 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 TMEM25Q86YD3 366 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 KIAA1958Q8N8K9 716 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 ZBTB44Q8NCP5 570 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 SLC35F5Q8WV83 523 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 SECISBP2LQ93073 1101 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 SAMSN1Q9NSI8 373 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 ZSCAN32Q9NX65 697 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 CLIC5Q9NZA1 410 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 TBC1D14Q9P2M4 693 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 DNMT3LQ9UJW3 386 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 CNTN6Q9UQ52 1028 aa12.24□□□□□ -0.45
RABGGTA-216ENST00000560243 SDK1Q7Z5N4 2213 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 YJEFN3A6XGL0 299 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 BECN2A8MW95 431 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 CHURC1-FNTBB4DL54 471 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 E7ENQ6 273 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 M0QYV0 167 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 STC2O76061 302 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 KLKB1P03952 638 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 HMBSP08397 361 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 SETSIPP0DME0 302 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 ADH5P11766 374 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 LCP1P13796 627 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 DRD1P21728 446 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 PON1P27169 355 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 FNTBP49356 437 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 PSEN1P49768 467 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 SLC8A3P57103 927 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 EFEMP1Q12805 493 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 ARHGAP44Q17R89 818 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 MIIPQ5JXC2 388 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 HEATR6Q6AI08 1181 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 KLHDC10Q6PID8 442 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 GBP6Q6ZN66 633 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 HTR3DQ70Z44 454 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 SYNPOQ8N3V7 929 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 ZNF276Q8N554 614 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 P2RY11Q96G91 374 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 LRRC4Q9HBW1 653 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 SIX2Q9NPC8 291 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 RASAL2Q9UJF2 1139 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 PCDHGA2Q9Y5H1 932 aa12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 MYO18AQ92614 2054 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-216ENST00000560243 DMXL1Q9Y485 3027 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 K7EQS6 105 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 TRIM24O15164 1050 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 LILRB5O75023 590 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 PAPSS2O95340 614 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 ADH1CP00326 375 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 RALAP11233 206 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 PXNP49023 591 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 SEC13P55735 322 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 KDSRQ06136 332 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 SRSF5Q13243 272 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 MAN2A1Q16706 1144 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 EXOC3L4Q17RC7 722 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 DPY19L2P1Q6NXN4 242 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 DENND1BQ6P3S1 775 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 ZC3H14Q6PJT7 736 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 Q6ZNB5 142 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 NAT16Q8N8M0 369 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 RPLP0P6Q8NHW5 317 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 CLEC4CQ8WTT0 213 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 ATRIPQ8WXE1 791 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 KCTD13Q8WZ19 329 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 EDEM1Q92611 657 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms