RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 OBP2AQ9NY56 170 aa10.56□□□□□ -0.72
USP3-216ENST00000559873 ADAM22Q9P0K1 906 aa10.56□□□□□ -0.72
USP3-216ENST00000559873 ARHGAP20Q9P2F6 1191 aa10.56□□□□□ -0.72
USP3-216ENST00000559873 CHORDC1Q9UHD1 332 aaPredicted RBP10.56□□□□□ -0.72
USP3-216ENST00000559873 DNMT3LQ9UJW3 386 aa10.56□□□□□ -0.72
USP3-216ENST00000559873 STAP1Q9ULZ2 295 aa10.56□□□□□ -0.72
USP3-216ENST00000559873 ARHGAP26Q9UNA1 814 aa10.56□□□□□ -0.72
USP3-216ENST00000559873 EYSQ5T1H1 3165 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 TTC28Q96AY4 2481 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 C2orf78A6NCI8 922 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 ECI2O75521 394 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 DAB1O75553 588 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 ERBB2P04626 1255 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 KPNA1P52294 538 aaPredicted RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 GSCP56915 257 aaPredicted RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 YWHAZP63104 245 aaKnown RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 SLC7A9P82251 487 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 MAPK8IP2Q13387 824 aaPredicted RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 FAM78AQ5JUQ0 283 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 FAM102AQ5T9C2 384 aaPredicted RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 ACAD10Q6JQN1 1059 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 CC2D1AQ6P1N0 951 aaPredicted RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 OLFML1Q6UWY5 402 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 SLC26A9Q7LBE3 791 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 XYLT1Q86Y38 959 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 ARID3BQ8IVW6 561 aaPredicted RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 SCUBE3Q8IX30 993 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 YAF2Q8IY57 180 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 TC2NQ8N9U0 490 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 SPC24Q8NBT2 197 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 DEPDC1BQ8WUY9 529 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 ELSPBP1Q96BH3 223 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 SERPINB11Q96P15 392 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 PCDHB18PQ96TA0 734 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 SLC46A2Q9BY10 475 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 CCSER2Q9H7U1 834 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 NMUR1Q9HB89 426 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 THG1LQ9NWX6 298 aaKnown RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 RRN3Q9NYV6 651 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 ADAMTS1Q9UHI8 967 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 RASAL2Q9UJF2 1139 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 LSM7Q9UK45 103 aaKnown RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 SCINQ9Y6U3 715 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 ZNF638Q14966 1978 aaKnown RBP10.55□□□□□ -0.72
USP3-216ENST00000559873 XIRP2A4UGR9 3374 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 OBSL1O75147 1896 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 NOTCH4Q99466 2003 aa10.55□□□□□ -0.72
USP3-216ENST00000559873 DOCK8Q8NF50 2099 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 TMCO5BA8MYB1 307 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 DDX3XO00571 662 aaKnown RBP eCLIP10.54□□□□□ -0.726e-9■■■■□ 22.1
USP3-216ENST00000559873 COCHO43405 550 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 RTN2O75298 545 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 NCAM1P13591 858 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 TCF3P15923 654 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 CYLC1P35663 651 aaPredicted RBP10.54□□□□□ -0.72
USP3-216ENST00000559873 EIF4A3P38919 411 aaKnown RBP10.54□□□□□ -0.72
USP3-216ENST00000559873 COG7P83436 770 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 EFEMP1Q12805 493 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 HTR4Q13639 388 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 SLC18A3Q16572 532 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 DNAJC24Q6P3W2 148 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 ALKBH5Q6P6C2 394 aaKnown RBP10.54□□□□□ -0.72
USP3-216ENST00000559873 MON1BQ7L1V2 547 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 ARCQ7LC44 396 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 SCD5Q86SK9 330 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 GJD3Q8N144 294 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 KIAA1958Q8N8K9 716 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 ARL14EPQ8N8R7 260 aaPredicted RBP10.54□□□□□ -0.72
USP3-216ENST00000559873 C3orf20Q8ND61 904 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 SLC30A5Q8TAD4 765 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 ADAMTS19Q8TE59 1207 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 NUP210Q8TEM1 1887 aaPredicted RBP10.54□□□□□ -0.72
USP3-216ENST00000559873 CLEC4CQ8WTT0 213 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 ZNF653Q96CK0 615 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 UHRF1Q96T88 793 aaPredicted RBP10.54□□□□□ -0.72
USP3-216ENST00000559873 SELENOOQ9BVL4 669 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 FAM204AQ9H8W3 233 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 NHEJ1Q9H9Q4 299 aaPredicted RBP10.54□□□□□ -0.72
USP3-216ENST00000559873 TDP1Q9NUW8 608 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 TJP2Q9UDY2 1190 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 SH3BP1Q9Y3L3 701 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 PAXBP1Q9Y5B6 917 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 CPQQ9Y646 472 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 NUMBLQ9Y6R0 609 aa10.54□□□□□ -0.72
USP3-216ENST00000559873 DOCK6Q96HP0 2047 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 COL6A3P12111 3177 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 ANHXE9PGG2 379 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 GOLGA8SH3BPF8 625 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 SLC9A3R1O14745 358 aaPredicted RBP10.53□□□□□ -0.72
USP3-216ENST00000559873 SLC34A2O95436 690 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 PRAMEF12O95522 483 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 PLEKP08567 350 aaPredicted RBP10.53□□□□□ -0.72
USP3-216ENST00000559873 PSMC3P17980 439 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 SDC4P31431 198 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 GBP1P32455 592 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 USP4Q13107 963 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 MTA1Q13330 715 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 NNTQ13423 1086 aa10.53□□□□□ -0.72
USP3-216ENST00000559873 ARHGAP29Q52LW3 1261 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms