RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PCDHB18PQ96TA0 734 aa21.28■■□□□ 1
TSPAN3-207ENST00000559494 KLF16Q9BXK1 252 aaPredicted RBP21.28■■□□□ 1
TSPAN3-207ENST00000559494 BRD9Q9H8M2 597 aa21.28■■□□□ 1
TSPAN3-207ENST00000559494 AIPL1Q9NZN9 384 aa21.28■■□□□ 1
TSPAN3-207ENST00000559494 HELZP42694 1942 aaKnown RBP21.27■■□□□ 1
TSPAN3-207ENST00000559494 A0A1W2PQJ5 194 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 FAM170AA1A519 330 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 CHADO15335 359 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 SIGLEC14Q08ET2 396 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 PTPN20Q4JDL3 420 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 SARM1Q6SZW1 724 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 CPA5Q8WXQ8 436 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 EDEM1Q92611 657 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 WBP2Q969T9 261 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 ASIC4Q96FT7 647 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 NOX5Q96PH1 765 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 AGPAT1Q99943 283 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 NACA2Q9H009 215 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 WNT16Q9UBV4 365 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 DNMT3LQ9UJW3 386 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 CAPN11Q9UMQ6 739 aa21.27■□□□□ 0.99
TSPAN3-207ENST00000559494 ITIH6Q6UXX5 1313 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 ARNTLO00327 626 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 LSM8O95777 96 aaKnown RBP21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 LTFP02788 710 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 ERBB2P04626 1255 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 CYP1A1P04798 512 aaPredicted RBP21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 FYNP06241 537 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 CCDC172P0C7W6 258 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 NOMO3P69849 1222 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 MTF1Q14872 753 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 ASIC2Q16515 512 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 ARHGAP29Q52LW3 1261 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 SFMBT2Q5VUG0 894 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 NAA35Q5VZE5 725 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 IRF7Q92985 503 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 FAM83CQ9BQN1 747 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 ABCC13Q9NSE7 274 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 THG1LQ9NWX6 298 aaKnown RBP21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 CFAP97Q9P2B7 532 aa21.26■□□□□ 0.99
TSPAN3-207ENST00000559494 GYPCP04921 128 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 EFEMP1Q12805 493 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 TADA2BQ86TJ2 420 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 VSTM4Q8IW00 320 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 OLIG1Q8TAK6 271 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 PIWIL1Q96J94 861 aaKnown RBP21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 CDK5RAP1Q96SZ6 601 aaKnown RBP21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 SYT11Q9BT88 431 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 ANP32EQ9BTT0 268 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 LINC00597Q9H2U6 94 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 TRPV5Q9NQA5 729 aa21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.25■□□□□ 0.99
TSPAN3-207ENST00000559494 KRBA1A5PL33 1030 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 UNGP13051 313 aaPredicted RBP21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 GABRB2P47870 512 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 ZBED6P86452 979 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 PFKPQ01813 784 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 TAF5Q15542 800 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 SLC44A4Q53GD3 710 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 SPECC1LQ69YQ0 1117 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 TRIM68Q6AZZ1 485 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 OR6B2Q6IFH4 312 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 CC2D1AQ6P1N0 951 aaPredicted RBP21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 TRIM72Q6ZMU5 477 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 FAM183BPQ6ZVS7 135 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 RSRC2Q7L4I2 434 aaKnown RBP21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 ERICH1Q86X53 443 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 MIB1Q86YT6 1006 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 FMNL3Q8IVF7 1028 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 IQCDQ96DY2 449 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 TRIM5Q9C035 493 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 RASAL2Q9UJF2 1139 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 FBXL21Q9UKT6 434 aa21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 LUC7L2Q9Y383 392 aaKnown RBP21.24■□□□□ 0.99
TSPAN3-207ENST00000559494 TMEM221A6NGB7 291 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 M0R296 226 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 SCAMP3O14828 347 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 SART1O43290 800 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 IRF1P10914 325 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 SKILP12757 684 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 PRKCIP41743 596 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 SNX16P57768 344 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 TNK2Q07912 1038 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 C2CD6Q53TS8 623 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 DDX42Q86XP3 938 aaKnown RBP eCLIP21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 SLC30A5Q8TAD4 765 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 IPO4Q8TEX9 1081 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 RNF139Q8WU17 664 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 DNASE1L2Q92874 299 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 FAM149B1Q96BN6 582 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 C18orf8Q96DM3 657 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 HAUS4Q9H6D7 363 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 SYNCQ9H7C4 482 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 C11orf16Q9NQ32 467 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 HPS4Q9NQG7 708 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 OLA1Q9NTK5 396 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 DUS2Q9NX74 493 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 MARCH2Q9P0N8 246 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 SFMBT1Q9UHJ3 866 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 CA14Q9ULX7 337 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms