RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 ZDHHC11BP0C7U3 371 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 CD59P13987 128 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 SYT1P21579 422 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 CDH8P55286 799 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 ASIC1P78348 528 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 E2F4Q16254 413 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 FAM26FQ5R3K3 315 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 SDE2Q6IQ49 451 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 SYAP1Q96A49 352 aaPredicted RBP17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 SMARCD1Q96GM5 515 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 ACOX2Q99424 681 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 NACA2Q9H009 215 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 CD248Q9HCU0 757 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 DNAJC17Q9NVM6 304 aaKnown RBP17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 COMMD8Q9NX08 183 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 A0A1W2PQD8 194 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 FAM221BA6H8Z2 402 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 AP1G2O75843 785 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 SYPP08247 313 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 NDUFV2P19404 249 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 SNRPFP62306 86 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 AMPD3Q01432 767 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 HNRNPDQ14103 355 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 HTR3DQ70Z44 454 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 NELFCDQ8IXH7 590 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 CHPFQ8IZ52 775 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 TRIML1Q8N9V2 468 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 IPO4Q8TEX9 1081 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 ERLEC1Q96DZ1 483 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 TNIP3Q96KP6 325 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 HSPA12BQ96MM6 686 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 VRTNQ9H8Y1 702 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 DNAAF2Q9NVR5 837 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 ITPR1Q14643 2758 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 UBE4BO95155 1302 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 FREM2Q5SZK8 3169 aa17.2■□□□□ 0.34
CDC42BPB-205ENST00000559245 NEDD8-MDP1E9PL57 170 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 CACNG3O60359 315 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 TLR5O60602 858 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 CLSTN1O94985 981 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 CASP4P49662 377 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 PGFP49763 221 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 ZNF423Q2M1K9 1284 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 ZNF699Q32M78 642 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 ZNF667Q5HYK9 610 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 SCARA5Q6ZMJ2 495 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 RAB44Q7Z6P3 723 aaPredicted RBP17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 RGL4Q8IZJ4 473 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 FUKQ8N0W3 1084 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 ZMIZ2Q8NF64 920 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 SCFD1Q8WVM8 642 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 XPO6Q96QU8 1125 aaKnown RBP17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 BBS2Q9BXC9 721 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 CUEDC2Q9H467 287 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 CD93Q9NPY3 652 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 KRT82Q9NSB4 513 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 ACACAQ13085 2346 aa17.19■□□□□ 0.34
CDC42BPB-205ENST00000559245 PRRT4C9JH25 899 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 TAF4O00268 1085 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 GREM1O60565 184 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 TYRP14679 529 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 BIRC3Q13489 604 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 ACAP1Q15027 740 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 STK38Q15208 465 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 CNNM4Q6P4Q7 775 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 TPGS1Q6ZTW0 290 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 TOGARAM2Q6ZUX3 1019 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 ACOT1Q86TX2 421 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 PLEKHO2Q8TD55 490 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 ELMO3Q96BJ8 720 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 DHX58Q96C10 678 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 ZNF419Q96HQ0 510 aaPredicted RBP17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 CAMK1GQ96NX5 476 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 SMOQ99835 787 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 GABRG3Q99928 467 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 KLF16Q9BXK1 252 aaPredicted RBP17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 SDCBP2Q9H190 292 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 SLC6A17Q9H1V8 727 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 TLR8Q9NR97 1041 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 MARK1Q9P0L2 795 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 WDR35Q9P2L0 1181 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 RAD54BQ9Y620 910 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 CKAP5Q14008 2032 aa17.18■□□□□ 0.34
CDC42BPB-205ENST00000559245 SH3BP5O60239 455 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 NDUFS2O75306 463 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 GJB3O75712 270 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 BEST1O76090 585 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 TBX18O95935 607 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 CCDC130P13994 396 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 SLC14A1Q13336 389 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 TRIP6Q15654 476 aaKnown RBP17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 PLEKHG6Q3KR16 790 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 UNC13DQ70J99 1090 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 PROSER1Q86XN7 944 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 C12orf56Q8IXR9 622 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 KNL1Q8NG31 2342 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 MRGPRX1Q96LB2 322 aa17.17■□□□□ 0.34
CDC42BPB-205ENST00000559245 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms