RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 FGFR3P22607 806 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 PMLP29590 882 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 FOXD4Q12950 439 aaPredicted RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 DPYSL3Q14195 570 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 PDK3Q15120 406 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 EML3Q32P44 896 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 DCAF15Q66K64 600 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 BTN2A1Q7KYR7 527 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 MARK2Q7KZI7 788 aaKnown RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 CCDC103Q8IW40 242 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 MAB21L3Q8N8X9 362 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 CGRRF1Q99675 332 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 ZNF277Q9NRM2 450 aaPredicted RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 C6orf203Q9P0P8 240 aaPredicted RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 WDR35Q9P2L0 1181 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 IPO11Q9UI26 975 aaKnown RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 ZMYND8Q9ULU4 1186 aaPredicted RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 DCXO43602 365 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 TBC1D12O60347 775 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 TPST1O60507 370 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 PEX11AO75192 247 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 E2F6O75461 281 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 DDHD2O94830 711 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 AMPD1P23109 780 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 STIP1P31948 543 aaKnown RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 CHN2P52757 468 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 GCNT1Q02742 428 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 FAM182AQ5T1J6 154 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 CES3Q6UWW8 571 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 ZNF483Q8TF39 744 aaPredicted RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 ASZ1Q8WWH4 475 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 ZNF669Q96BR6 464 aaPredicted RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 NR1H4Q96RI1 486 aaPredicted RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 FSD1LQ9BXM9 530 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 PHACTR1Q9C0D0 580 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 MRPL40Q9NQ50 206 aaKnown RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 SEPT3Q9UH03 358 aa7.35□□□□□ -1.23
USP3-210ENST00000559192 TSR3Q9UJK0 312 aaKnown RBP7.35□□□□□ -1.23
USP3-210ENST00000559192 DFFAO00273 331 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 PRPF4O43172 522 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP3-210ENST00000559192 PEX1O43933 1283 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 ITGB3P05106 788 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 FAM58BPP0C7Q3 252 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 S100A5P33763 92 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 ATP6V1E1P36543 226 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 BST1Q10588 318 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 WASHC5Q12768 1159 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 STRIP1Q5VSL9 837 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 ANO7Q6IWH7 933 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 RBM44Q6ZP01 1051 aaKnown RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 TSHZ1Q6ZSZ6 1077 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 DHDDSQ86SQ9 333 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 CDH24Q86UP0 819 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 SHC3Q92529 594 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 KIF12Q96FN5 646 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 MARK4Q96L34 752 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 NMUR2Q9GZQ4 415 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 SYBUQ9NX95 663 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 DCDC2Q9UHG0 476 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 STRNO43815 780 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 ICAM1P05362 532 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 POLBP06746 335 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 RPL22P35268 128 aaKnown RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 PKNOX1P55347 436 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 NME5P56597 212 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 MRPS22P82650 360 aaKnown RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 ITGA9Q13797 1035 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 Q3C1V9 767 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 OR9Q1Q8NGQ5 310 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 FAM81AQ8TBF8 368 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 DLGAP3O95886 979 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 CCNB1P14635 433 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 GARTP22102 1010 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 CHRNA5P30532 468 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 EIF2B2P49770 351 aaKnown RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 TTC33Q6PID6 262 aaPredicted RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 EXOC8Q8IYI6 725 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 STKLD1Q8NE28 680 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 JADE3Q92613 823 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 DCUN1D5Q9BTE7 237 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 ZNF70Q9UC06 446 aaPredicted RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 LGALS13Q9UHV8 139 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 A0A0B4J269 797 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 ARHGEF37A1IGU5 675 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 PRR5-ARHGAP8B1AHC4 643 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 CYP3A4P08684 503 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 CETPP11597 493 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 GYS1P13807 737 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 ALDH1A3P47895 512 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 PSEN1P49768 467 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 WDR4P57081 412 aaKnown RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 CRADDP78560 199 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 ARHGAP8P85298 464 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 GPR141Q7Z602 305 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 IFNEQ86WN2 208 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 PLD3Q8IV08 490 aa7.34□□□□□ -1.23
USP3-210ENST00000559192 TFB1MQ8WVM0 346 aaKnown RBP7.34□□□□□ -1.23
USP3-210ENST00000559192 NDNQ99608 321 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms