RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 GAD2Q05329 585 aa17.92■□□□□ 0.46
LRRC28-210ENST00000558879 HTR3DQ70Z44 454 aa17.92■□□□□ 0.46
LRRC28-210ENST00000558879 HEXIM2Q96MH2 286 aaKnown RBP17.92■□□□□ 0.46
LRRC28-210ENST00000558879 UBXN6Q9BZV1 441 aa17.92■□□□□ 0.46
LRRC28-210ENST00000558879 NACA2Q9H009 215 aa17.92■□□□□ 0.46
LRRC28-210ENST00000558879 DLL3Q9NYJ7 618 aa17.92■□□□□ 0.46
LRRC28-210ENST00000558879 CLIC5Q9NZA1 410 aa17.92■□□□□ 0.46
LRRC28-210ENST00000558879 CTNND2Q9UQB3 1225 aa17.92■□□□□ 0.46
LRRC28-210ENST00000558879 MUC22E2RYF6 1773 aaPredicted RBP17.91■□□□□ 0.46
LRRC28-210ENST00000558879 NYNRINQ9P2P1 1898 aaKnown RBP17.91■□□□□ 0.46
LRRC28-210ENST00000558879 A0A0A0MRY4 1105 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 RARGP13631 454 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 TBXAS1P24557 533 aaPredicted RBP17.91■□□□□ 0.46
LRRC28-210ENST00000558879 SLC6A11P48066 632 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 PXNP49023 591 aaPredicted RBP17.91■□□□□ 0.46
LRRC28-210ENST00000558879 MARSP56192 900 aaKnown RBP17.91■□□□□ 0.46
LRRC28-210ENST00000558879 KLHL10Q6JEL2 608 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 Q6ZNB5 142 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.91■□□□□ 0.46
LRRC28-210ENST00000558879 PIGZQ86VD9 579 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 SFTPA1Q8IWL2 248 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 FAM160A2Q8N612 972 aaPredicted RBP17.91■□□□□ 0.46
LRRC28-210ENST00000558879 ANKRD52Q8NB46 1076 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 LMO3Q8TAP4 145 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 NELFBQ8WX92 580 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 PNKPQ96T60 521 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 SPHK2Q9NRA0 654 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 EBF1Q9UH73 591 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 MMP17Q9ULZ9 603 aa17.91■□□□□ 0.46
LRRC28-210ENST00000558879 BICDL2A1A5D9 508 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.9■□□□□ 0.46
LRRC28-210ENST00000558879 MDM4O15151 490 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 RPP40O75818 363 aaKnown RBP17.9■□□□□ 0.46
LRRC28-210ENST00000558879 KAT7O95251 611 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 KIR2DL1P43626 348 aaPredicted RBP17.9■□□□□ 0.46
LRRC28-210ENST00000558879 BCAT1P54687 386 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 YWHAEP62258 255 aaKnown RBP17.9■□□□□ 0.46
LRRC28-210ENST00000558879 MRPS21P82921 87 aaKnown RBP17.9■□□□□ 0.46
LRRC28-210ENST00000558879 CCDC40Q4G0X9 1142 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 BHLHA9Q7RTU4 235 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 ERMP1Q7Z2K6 904 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 RASSF3Q86WH2 238 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 MARK1Q9P0L2 795 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 NAGPAQ9UK23 515 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 TSPAN16Q9UKR8 245 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 PI4KAP42356 2102 aa17.9■□□□□ 0.46
LRRC28-210ENST00000558879 BIN1O00499 593 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 XPO1O14980 1071 aaKnown RBP17.89■□□□□ 0.45
LRRC28-210ENST00000558879 AXIN1O15169 862 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 P4HA2O15460 535 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 TULP3O75386 442 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 APBB3O95704 486 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 APODP05090 189 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 SEC13P55735 322 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 LMNB2Q03252 620 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 KDSRQ06136 332 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 GOLGA8FQ08AF8 430 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 GOLGA8DPQ0D2H9 430 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 SPEM2Q0P670 501 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 PAK1Q13153 545 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 GOLGA7BQ2TAP0 167 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 HSF5Q4G112 596 aaPredicted RBP17.89■□□□□ 0.45
LRRC28-210ENST00000558879 PKDCCQ504Y2 493 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 SGO2Q562F6 1265 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 C2orf27AQ580R0 203 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 CEP68Q76N32 757 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 TRIM59Q8IWR1 403 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 TRIML1Q8N9V2 468 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 ARHGEF4Q9NR80 690 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 DNMT3LQ9UJW3 386 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 LSM7Q9UK45 103 aaKnown RBP17.89■□□□□ 0.45
LRRC28-210ENST00000558879 NUDT5Q9UKK9 219 aa17.89■□□□□ 0.45
LRRC28-210ENST00000558879 TULP2O00295 520 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 O00370 1275 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 CACNG3O60359 315 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 STC2O76061 302 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 EPN2O95208 641 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 GRIA2P42262 883 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 PLA2G4AP47712 749 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 UBE2HP62256 183 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 PDE4CQ08493 712 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 BST2Q10589 180 aaKnown RBP17.88■□□□□ 0.45
LRRC28-210ENST00000558879 LRMPQ12912 555 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 C10orf120Q5SQS8 335 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 PM20D1Q6GTS8 502 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 TADA2BQ86TJ2 420 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 TMEM25Q86YD3 366 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 TERB1Q8NA31 727 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 IL17RCQ8NAC3 791 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 LOXL4Q96JB6 756 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 ZC3H10Q96K80 434 aaKnown RBP17.88■□□□□ 0.45
LRRC28-210ENST00000558879 NT5C1BQ96P26 610 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 CDK5RAP1Q96SZ6 601 aaKnown RBP17.88■□□□□ 0.45
LRRC28-210ENST00000558879 USP18Q9UMW8 372 aa17.88■□□□□ 0.45
LRRC28-210ENST00000558879 RALAP11233 206 aa17.87■□□□□ 0.45
LRRC28-210ENST00000558879 VDRP11473 427 aa17.87■□□□□ 0.45
LRRC28-210ENST00000558879 HNRNPLP14866 589 aaKnown RBP eCLIP17.87■□□□□ 0.451e-7■■■□□ 14.9
LRRC28-210ENST00000558879 TNFRSF4P43489 277 aa17.87■□□□□ 0.45
LRRC28-210ENST00000558879 TKTL1P51854 596 aa17.87■□□□□ 0.45
LRRC28-210ENST00000558879 PUM1Q14671 1186 aaKnown RBP eCLIP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms